KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139326754
Entry
139326754         CDS       T11059                                 
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    139326754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcae03021]
    139326754
Transcription machinery [BR:pcae03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     139326754
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 139326754
NCBI-ProteinID: XP_070812707
LinkDB
Position
Unknown
AA seq 578 aa
MFAGLQELGVANGEDLKETLTNCMEPLKAIEQFQTENGILLPSLQSALPFLDLHGTPRLE
FHQSVFDELREKLLERVSAIASEGKAEERYKKLEDLLEKSFPLVKMPSIQPVVMCVMKHL
PKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKENALFSND
LSVLQNFFSPSPKMRRQGEVVQKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAE
LLMSLHDLDISEICTVDPCHKFTWCLDACIREKFVDNKRARELQGFLDGVKKGQEQVLGD
LSMILCDPFAINTLALSTIRNLQELIGQEVLPRESLELLLLLRMLSLGQGAWDVIDSQIF
KEPKLEVDLITKFLPMLMAFVVDDYTFTVDQKLPAEEKAPASYPSAIPEMFPKFLQEQRI
ACEIGLYYVLHITKQRNKNALLRLVPTLTETFNDLAFGDIFLHLFTGNLTLLADEFGQDD
FCAVLFDRFFLTACPRKDNVHRHLLRMLLHLHHKVVPTKLESLQKSLEPTKQSSEAVKEL
FNQLGEKLEVRKASPVPEAEAPPMDLPLPTVSSTPVPP
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgtttgccggcttgcaagagctcggcgtggccaacggggaggacttgaaggagacgctg
accaattgcatggagcccctcaaggccatcgagcagttccagacagaaaacggcatcctg
ttgccctctcttcagtccgccctccctttcctggacctccatggaacccctcggctggag
ttccaccagtcggtgtttgatgagctgcgtgagaagcttctggagagggtctcggctatc
gcctctgaaggaaaggccgaagaaaggtacaaaaagctggaagatctcctggagaagagc
ttccctctggtaaaaatgccatccatccagccggtggtgatgtgtgtcatgaaacatctg
cccaaggttcccgaaaaaaagttgaagctcgtgatggccgacaaggatctgtataaagcc
tgtgccgtggaagtgaaacgccagatctggcaagataaccaggctctgtttggagacgag
gtttccccgttgttgaagcagtatatcctggagaaggaaaatgctttattcagtaacgac
ctctcggtgctgcagaacttcttcagcccttcccctaaaatgaggcggcagggagaggtg
gttcagaagctgacccagatgatcgggaagaacgtgaagctgtatgacatggtcctccaa
ttcctccggactctcttccttcggacacggaatgtccattattgcacgttaagggcggag
ctcctgatgtccctccacgatctggacatcagcgagatctgcacggtggacccctgccac
aagtttacttggtgcctcgatgcttgcattcgggaaaagtttgtcgacaacaagcgggcg
cgggagctgcagggtttcctcgacggagtgaaaaaaggccaagagcaagtcttgggggac
ctgtcgatgatcctgtgtgatccgtttgccattaacaccttggctttgagtaccatccgg
aatttgcaggagctgattggtcaggaagtgttacccagggaaagcctggagctcttgtta
cttctgaggatgctgtccctgggacaaggagcttgggatgtaatcgacagccagatcttc
aaagaacccaaactggaagtggatttgatcaccaaatttctgcccatgctgatggccttc
gtggtggacgactacaccttcaccgtggatcagaagctgcctgcggaagagaaagcgcca
gcgtcttaccccagcgccatccctgagatgtttccaaaatttctgcaagagcagcggatc
gcctgtgagatcggcctttactacgtgcttcacatcaccaagcaaaggaacaagaacgca
ttgcttcgcttggttcccaccctgacggagacttttaacgacctggcctttggcgacatt
ttcctgcatctgttcaccggcaacctcaccttgctggctgacgaatttgggcaggacgat
ttctgcgctgtccttttcgaccgcttcttcctgacggcctgccccaggaaggacaacgtc
caccggcacctgctgaggatgctgcttcacctccatcataaagtggtccccaccaagttg
gagtcgttgcaaaaatccttggaacccaccaagcagagcagcgaagcggtgaaagagctt
ttcaaccagctgggcgagaaactggaagtccgcaaagccagccctgtcccagaagccgag
gcaccaccgatggatttgcccctcccgacagtatcttctaccccggttccaccatag

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