Pituophis catenifer annectens (San Diego gophersnake): 139327206
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Entry
139327206 CDS
T11059
Symbol
TTC21B
Name
(RefSeq) tetratricopeptide repeat protein 21B isoform X1
KO
K19673
tetratricopeptide repeat protein 21B
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcae03037
]
139327206 (TTC21B)
Cilium and associated proteins [BR:
pcae03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
139327206 (TTC21B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
TPR_19
ARM_TT21_4th
TPR_14
TPR_2
TPR_16
TPR_1
TPR_12
TPR_8
TPR_7
TPR_6
ANAPC3
TPR_CcmH_CycH
TPR_11
TPR_17
CFAP70_TPR_C
CFAP70_mid_TPR
TPR_21
TPR_Slam
TPR_9
SPOB_a
TPR_15
Fis1_TPR_C
TPR_Psidin_N
YfdX
TPR_YpiA_C
Motif
Other DBs
NCBI-GeneID:
139327206
NCBI-ProteinID:
XP_070813035
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MVLQSPLGFAWRSGSASRRALINYYCQEGYFRHVQTIANEGLKTFANDPVFLFYHSYGIL
MEGHVQEALLSLESIKNKQEVCLCTMMAMIYAHKKRSNPDREVIMDLDAKLKEHRKTAGQ
EALYFAGLFLWHIGRYEKAREYIDRMIKISNGSSKEGWILKGWLDVTSGKEASIKKAGKC
FDEGLQNENDIFGLMGKAQYYEARQNYTGALETLNQIIANFPRFLPAFIKKMKLQLALQD
WEQSVETAQRLLQKDAFNLDALKMEAVHYLCREGNIPEASSRLKDLISALDQLEPQNPPL
FCKIALVFSRTCGRNPHILQLTQMLVDRAFSLAPQNADIATELGYQMLFQGKIKEAMKCY
KTAMALDETSVPALTGIIRSQLMEGKLDDVEQQLEFLKEVQQSIGISAELSYLRAVLAMK
KNKRQEEVITLLNDVLDAHFSSLQGLPLGIEYFEKLNPDFLIEIIKEYLNFCPSQPASAG
QPPSPLLRPCASVLETVMKTVPGLLQAAYLVAKVKYLSGNYEASERILQHCLEQNPSYAE
AHLLMAQVQLLQSNFQLCAQSLELCLSYNFQIREHPVYHLVKAQAQIKMGEIAEAIKTLQ
MAMNLPGMRTSTSSSKSKTIEIDGRERLSLYLELVEAHRLNGEQHEAIKILQDAINEFSG
TSEELRVMITNADLALMQGDVEAALTMFRNITPEQTYFVQAKEKIAEIYLKYRRDKKLYA
SCYRDLVEKMPSSHTFLLLGDAYMNIQEPEEAIEAYEQSLKKNPRDGALARKIGNALVKT
HNYSKAISYYEAALKTGQQNILCYDLAELLLQLSQHDKAEKVLRQVLDHEPVNDLSSLMD
DIRYLVLLAKIYSKMERTEDAVFSLQQAQEMQAKVLKRIQIEQLDAVPLQKQLAAEICAE
IAKHLATQRNYEKAITFYKEALAHCETDNKVMLELARLYLALDEVDACQYQCAALLKNDR
DNAAATMMMADLMFKKQDYEQAVFHFQQLLDRHPDDYTTLSRLIDLLRRAGKLEEVPRFL
AMAEKHSPRTKLDSGFHYCKGLYLWYTGEPNDALRHFNKARKDNDWGQNAVYNMIEICLN
PDNETIGGEVFEHLDGDIDSSTEKQESVQLAVRTAEKLLKELKPQTAQGHVQLGIMENYC
LMATKQKSNVERALQAFTEIVTNEKDHVPALLGMATAYMILKQTPRARNQLKRISKMNWN
PIDAEEFEKSWLLLADIYIQSSKYDMASELLKRCLRHNRSCCKAYEYMGYIMEKEQAYRD
AAINYEMAWKYGNQTNPAIGFKLAFNYLKAKRHIDAITICRKVLEAHPNYPKIKKEILDK
ARASLRT
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaagccctttgggttttgcttggaggagcggatccgcttcccgcagggct
ttaattaattactactgtcaggaaggctattttcgccatgttcagactattgccaatgaa
ggcttgaagacatttgccaatgacccagtgtttcttttctaccattcttatggtattttg
atggaagggcacgtccaagaagctcttctcagtcttgaatccattaaaaacaaacaagaa
gtatgcctgtgcacaatgatggcaatgatctatgcccataaaaaaagatcaaatccagat
cgggaagttatcatggatctggatgccaagttgaaggagcatcgtaagacagcaggacag
gaggctttatattttgcaggactgttcttgtggcatattggccgctatgagaaagcccgc
gaatacattgacagaatgatcaagatctcaaatggtagcagtaaagaggggtggattcta
aaagggtggcttgatgtgactagtgggaaagaagcaagcatcaaaaaagctgggaaatgt
tttgatgaagggctccaaaatgagaatgatatttttggcctgatgggtaaagcccaatat
tatgaagcgcgtcagaattatacaggagctttggaaactctgaatcaaataattgcgaat
ttcccacgcttccttccagcatttattaaaaagatgaagctacagctggctttgcaggat
tgggagcagtcagttgagactgcccagaggttgttgcagaaagatgctttcaacctagat
gccttaaaaatggaggctgttcactatttgtgcagggaaggaaacatacctgaggcttcc
tccaggctgaaagatctgattagtgctttagatcagttggagccacagaatcctccgctt
ttctgtaagatagccttggtttttagcagaacgtgtggccgcaatccacacatcctgcag
ctgacccagatgttggtggacagagctttcagcttagctcctcagaatgcagacattgct
acagagctgggctatcagatgctttttcaaggaaaaataaaggaagctatgaaatgctac
aaaactgctatggctcttgatgagacaagtgttcctgcactaacaggaattatccgaagc
cagttaatggaagggaagttagatgatgtagaacagcagttggagttcctgaaagaagtt
cagcagtctattggaatatcagcagagctgtcttatctacgtgcagtattggctatgaag
aaaaataaaagacaagaagaagttattactttgttgaatgatgtactcgatgcccatttt
tcttctctccaaggtttacctcttggtatagaatattttgaaaaattaaacccagatttt
ttgatagaaattattaaggagtatcttaatttttgcccaagtcagcctgcaagtgcaggg
cagcctccttcaccacttctgaggccttgcgcatccgtccttgaaacggtgatgaaaacc
gtccctggtcttttacaagctgcctacttggttgcaaaagtgaaatatttatcaggcaac
tatgaagcctctgagaggatcttacaacactgtctggagcagaatccttcctatgccgag
gctcatctcctcatggcccaagtccaactgctgcaaagcaacttccaactctgcgctcag
tccctggagctctgtctaagttacaactttcagattagggaacatcctgtttaccactta
gtaaaagctcaagcccagataaagatgggtgagatagcagaagccatcaaaaccttgcag
atggcaatgaatttgccagggatgagaacaagtacatcgtcctctaaatcgaaaacaatt
gaaattgatgggcgcgaacgtctgtctctctacctggaactggtagaggctcatcgtttg
aatggtgaacagcatgaagctattaaaatcctccaagatgctatcaatgaattttctggt
acatctgaagaactgagagtcatgattactaatgcagacttagctcttatgcaaggagat
gttgaagcagctttaactatgttcagaaatataacaccagaacagacttattttgttcaa
gctaaagaaaagattgcagagatttatctaaagtacaggagagacaagaagctgtatgca
agctgttatagagacctggtggaaaaaatgcccagttcccatacctttcttctccttggt
gatgcatacatgaatattcaggagcctgaagaagccatagaggcttatgaacagtcttta
aagaaaaatcctagagatggagccttggctcgtaaaattgggaatgctctagtcaagact
cacaattattcaaaggcaatcagttactacgaagctgctctgaaaactggacagcagaat
atcctctgttatgacttggctgagctactgctacaattgagccagcatgacaaagcagaa
aaagttcttcggcaagtcttagatcacgaacctgtcaatgatttgtcttctctgatggac
gatatccgttacctggttcttcttgcaaagatttacagcaaaatggagagaactgaggat
gctgttttttcattgcaacaagctcaggagatgcaagccaaagtattgaagcggattcag
attgagcagctggatgctgttcctttgcagaagcaattggcagccgaaatttgtgcagag
atagcaaagcatttggcaacccagcggaactacgagaaagccattacattttacaaagaa
gctcttgcgcattgtgagaccgacaacaaggtgatgctggaacttgcccgtttatatctt
gcgttggatgaagtggatgcatgccagtaccagtgtgctgccttgctaaaaaatgatcga
gacaatgcagcagccactatgatgatggctgacctcatgttcaagaaacaggactacgag
caggctgtgtttcatttccagcagcttttggatcgccatcccgatgattatactacactc
tctcgtttaattgatctgttaagaagagctggaaaattagaggaagttccaagattcctt
gcaatggctgagaaacattccccaaggacaaaacttgattcaggttttcattattgcaaa
ggattgtatttgtggtacactggtgaaccaaatgatgcccttcgacattttaacaaagca
agaaaggataatgactggggacaaaatgcagtgtataatatgattgaaatttgcttaaac
cctgacaatgaaacgattggaggtgaggtatttgaacatctggatggtgacatagatagt
tctacagaaaagcaagaatcagtccagctggctgtgagaacagcagaaaaactcctaaaa
gaattgaagcctcagactgctcaaggtcacgttcagcttggcatcatggaaaattactgt
ttaatggcaaccaaacaaaaatcaaatgttgagcgagcactacaggcctttacagaaatt
gttactaatgagaaggatcatgtcccagcacttttgggaatggctacagcatacatgatt
ttaaagcaaaccccaagagccagaaaccaattgaaacgaatttcaaaaatgaactggaat
cccattgatgctgaagaatttgaaaaaagttggcttttgcttgcagatatttatatccag
tcttcaaaatatgacatggcgagtgaattactaaagcgatgccttcgtcacaataggtcc
tgttgcaaagcttatgaatatatgggatacattatggaaaaagagcaagcttacagagat
gcggctataaactatgagatggcgtggaaatatgggaaccaaaccaatccagccattggt
ttcaagctagcttttaattatctgaaagccaagagacatattgatgctatcactatttgt
cgtaaggttttagaagcacatccaaattacccgaagataaaaaaagaaatacttgataaa
gcacgtgcctctttaaggacttga
DBGET
integrated database retrieval system
