Pituophis catenifer annectens (San Diego gophersnake): 139327222
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Entry
139327222 CDS
T11059
Symbol
ITGB6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04510
Focal adhesion
pcae04512
ECM-receptor interaction
pcae04810
Regulation of actin cytoskeleton
pcae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139327222 (ITGB6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139327222 (ITGB6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
139327222 (ITGB6)
04810 Regulation of actin cytoskeleton
139327222 (ITGB6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcae04147
]
139327222 (ITGB6)
04515 Cell adhesion molecules [BR:
pcae04515
]
139327222 (ITGB6)
Exosome [BR:
pcae04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
139327222 (ITGB6)
Cell adhesion molecules [BR:
pcae04515
]
Integrins
Integrin beta subunits
139327222 (ITGB6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
I-EGF_1
PSI_integrin
Integrin_B_tail
EGF_2
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
139327222
NCBI-ProteinID:
XP_070813085
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MGIELLCIFFLFLQRNKNVQGNCDSGSAMNCEDCLLSGPSCGWCFQENFTDPSEIHKRCD
TLEKLISEGCHLNLIEFPISKVEIHENKPLSDGPQINGSKVTQISPQKITIFLRPGNEET
IQINVRQTEDYPVDLYYLMDLSASMDDDLKTIKELGSTLSKEMSKLTSNFQMGFGSFVEK
PVLPFINTLTEDLKNPCRNVPFDCLPTFGYKHVLSLTNDAERFNEIVKKQKISANLDTPE
GGFDAIMQATVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGKCHLDQQNE
YSMSTVLEYPTLGQLIEKIVQNNILLIFAVTKKQVHLYQQYADLIPGATVGTLQHDSGNV
LQLIIDAYKSLRSEIELEVLGDTDGLKLDFTAICSHGSAFQHQKKCSHIKVGEQVTFNVT
LSLSPLACGEGRRKVLIRATGLNEALEIEIQPECSCHCQKEAEVNNSKCNYGNGSFECGV
CVCNPGYMGPDCKCSEKDALSTESCKRFPEQILCSGRGDCYCGQCICHLSAYGNIYGPYC
ECDDFSCGRFRGLVCGGNGNCACGQCICHHGWIGEYCNCTTDTENCISNDGIICSGRGKC
VCGKCVCTNPGVSGNICEKYPTYDDPCNSKWSCVECYLASADLLHQEDCAEKCKLVDAMI
SHDEDITEDKWVRCVLQGKNESVVTFLMTANEQGKVIIHNIKQKDYPQPPNITMIMLGVS
TAVVVTGIVLLSMWKLFISFEDRKEVAKFEAERSKAKWQTGTNPLYRGSTTTFKNVTYKQ
KERQRGSPCNAY
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggggattgaattgctctgcatttttttcctatttctacaaaggaataagaatgtacaa
ggaaattgtgattcagggagtgccatgaactgtgaagattgtttgctctctggaccaagc
tgcggctggtgtttccaagagaattttactgatccatctgaaattcataaaaggtgtgac
actcttgaaaagcttatttcagaaggatgccatctgaatttaattgaatttcccatttcc
aaagtagagatccatgaaaacaagcccctgagtgatgggccacaaataaatggttcaaaa
gttactcagatttctcctcaaaagataactattttcctgagaccaggaaatgaagaaacg
atacagatcaatgttcgtcagactgaagattatccagttgatctctactacctcatggac
ctttcagcttctatggatgatgatttgaaaaccataaaggaactggggtctactttgtcc
aaagaaatgtctaagctcacaagtaactttcagatgggcttcgggtcttttgttgaaaaa
ccagttttaccattcatcaatactctgacggaagatctgaagaatccgtgccgaaatgtc
ccatttgattgtttgccaacatttggatacaagcatgttctgtcgttgacaaacgatgca
gaaagattcaatgaaattgtgaaaaaacagaaaatcagtgcaaatttagatactccagaa
ggaggatttgatgcaattatgcaggcaactgtttgtaaggaaaaaattggctggagaaat
gattcattacatctgttagtgtttgtgagtgatgctgattctcattttgggatggatagt
aaattagcaggaatagttattccaaatgatggaaaatgccacttggatcaacagaatgaa
tattccatgtcaactgttttggaatacccaactttaggacaattgatagagaagattgtg
caaaacaacattctattaatttttgcagtcaccaagaaacaagttcatttatatcagcaa
tatgcggatcttattcctggagctactgttggaacactacagcatgattctggaaatgtc
ctccagttgattatagatgcatataagtcactcaggtctgagatagagttggaggtgttg
ggagacacagatggattaaaacttgatttcactgccatctgcagccacggttctgccttt
caacaccagaagaaatgctctcatattaaagtcggagaacaggtcactttcaatgtgact
ttaagtttaagccctttggcttgtggtgaagggagaaggaaagtcctaatcagggccacc
ggtctaaacgaagcgttggagatcgagatccagcccgaatgcagctgtcattgtcagaag
gaagcggaggtgaataactccaagtgcaactacgggaatggttctttcgagtgtggggta
tgtgtgtgtaaccctggctacatgggtccagactgtaaatgcagcgaaaaagatgcactg
agtacagagtcctgcaaacgtttcccagaacagatcttgtgcagcggaagaggcgactgc
tattgtggacaatgcatttgccacctttcagcatatggaaatatatatgggccatactgt
gaatgcgatgatttctcttgtggcagatttagagggctggtctgtggaggcaatgggaac
tgtgcctgtggtcaatgcatttgccaccatggctggataggtgaatattgtaactgtacc
acggataccgaaaattgtatttctaatgatggcatcatctgcagtgggagaggcaaatgt
gtgtgtggaaaatgtgtatgcacaaatcctggggtttcaggcaacatctgtgaaaaatac
cctacatatgatgatccttgcaactctaaatggagctgtgtggaatgttatttagcttct
gctgatctactgcatcaggaagactgcgctgaaaaatgtaaattggttgacgcaatgatc
agtcatgatgaagatattacggaagataaatgggttcgttgtgtgttacaagggaaaaat
gaatctgttgtcacatttctgatgacagctaatgaacaggggaaagtcatcattcacaac
ataaagcaaaaagattatccacagcctccaaatattacaatgattatgttgggggtttct
actgcagtagtcgtcactgggattgttttactttccatgtggaaattatttatttcattt
gaagaccgtaaagaagtggctaaatttgaagcagaaaggtcgaaggccaaatggcaaacg
ggaacaaaccccctctacagaggctccacaacaacttttaagaatgtaacatacaaacaa
aaagaaaggcaacgtggcagtccttgcaatgcatactaa
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