Pituophis catenifer annectens (San Diego gophersnake): 139327595
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Entry
139327595 CDS
T11059
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139327595 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcae04147
]
139327595 (COPB1)
Membrane trafficking [BR:
pcae04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
139327595 (COPB1)
Exosome [BR:
pcae04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139327595 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
Cnd1
HEAT
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
139327595
NCBI-ProteinID:
XP_070813555
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLIIVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEPELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAVKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKDHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDYNEAAAADV
LEFVREAIQRFDNLRLLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPAQKLVTEMGTYATQSALSSSRPAKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVTLVQEKKKQNSFVAEAMLLMASILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTIQPDDPISFMQLTAKNEMSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIVDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVTGHIRIRAKSQGMALSLGDKINLSQKKTNL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaatgtgtgttacacgttaattatagtgccaatggactcagagcca
ccatctgaaataagtttaaagaacgatttggaaaaaggagatgtaaaattgaagaccgag
gccttgaaaaaagtgataataatgatcttaaatggtgaaaagttaccaggacttctgatg
actattattcggtttgtgctgccacttcaggaccacaccataaagaaactgcttttagta
ttttgggagattgttcccaaaactactccagatggtagattgctgcaagaaatgatcctt
gtttgtgatgcctacagaaaggatcttcaacatccaaatgaatttatcagaggctctact
ctccgttttctttgcaaacttaaagaaccagaactgctagagccattgatgccagctatc
cgggcatgtctggaacatcgtcatagttatgtgcgcagaaatgcagtccttgcaatttat
actatttacagaaactttgaacatcttatacctgatgcccctgagctgatccatgatttt
ctggtgaatgagaaagatgcaagttgcaaaagaaatgccttcatgatgctaattcatgct
gatcaggaccgagctttagattacttgagtacctgcattgaccaagtccagacatttggt
gatattctccagctggttattgtggagctaatctataaggtttgtcatgctaatccatca
gaaagagctcgatttattcgctgtatctacaatctactacaatcatcaagccctgcagta
aaatatgaagcagcaggaacattagtcactctttccagtgctccaactgcagtcaaggca
gcagctcagtgctatattgacctgattattaaagaaagtgacaacaatgtgaagctgatc
gttctggatcgcttgattgaactcaaggatcacccttcccacgaaagagtactacaagat
ttggttatggacatactgagagttttgagtactcctgatttggaagttcgcaaaaagaca
ttacagttggctcttgatcttgtatcttccagaaatgtagaagagctggtgattgttttg
aagaaagaagtcattaaaacaaataacgtgactgagcacgaagacactgataaatacaga
cagttgcttgttcggactttacattcttgtagtgttcggttcccagacatggctgccaac
gtcattcctgtgttgatggagtttttaagtgattacaatgaagcggcagctgcagatgta
ctggagtttgtgcgtgaagccattcagcgttttgataatctcaggctgctaattgtagag
aaaatgttggaagtcttccatgcgattaagtctgtcaaaatttatcggggagcactctgg
atccttggcgaatactgcagcacaaaggaagatatacaaagtgtaatgactgaggtccgt
agatcattgggagagatcccaatagtagaatctgaaatcaagaaagaagctggtgagcta
aaacctgaggaggaaatcactgtgggccctgcccagaagctggtcactgaaatgggaact
tatgcgacccagagtgcccttagtagctccagacctgccaaaaaggaagaagagagacct
ccactgagaggctttttgttggatggtgatttctttgttgcggcttcccttgcaacaact
ctgaccaaaattgctttacgttatgtgactctggttcaagaaaagaagaaacaaaattct
tttgtagctgaggcaatgctgcttatggccagtatcctccatttgggcaagtcatctctc
cccaagaagccaatcacagatgatgatgtggatcggatttctctgtgcctgaaagtgctc
tcagaatgttcccctctgatgaatgatattttcaacaaggagtgccggcaatccctttct
catatgttgtctgccaagctggaagaggagaagctgtctcagaagaaagagtctgagaag
aggaacgtaaccattcagccagatgatcctatttcttttatgcagctcactgctaaaaat
gaaatgagctcaaaggaagatcagtttcagctcagtcttttagcagctatgggaaacact
cagagaaaggaagctgctgacccactggcatccaagctcaacaaggtaactcagttgaca
ggtttttccgatcctgtctacgctgaagcatatgtccatgtcaaccagtatgatattgtg
ttggatgtgcttgtagtaaaccagaccagtgatactttgcagaattgcacgctagaattg
gctacgttgggtgacttgaagctggtggaaaagccatctcctctgacccttgcgccccat
gattttgccaatataaaagcgaatgtgaaagtagcttccactgaaaatggaattattttt
ggcaacatcgtatatgatgtttctggagcagccagtgatagaaactgtgttgttcttagt
gacatacacattgatatcatggattatatccagcctgctacttgtactgatgctgagttc
cgtcagatgtgggcagaatttgaatgggaaaacaaagttacagtgaacaccaatatagtg
gatctgaatgaatacttgcagcatatcttaaaatcaactaatatgaaatgccttacccca
gaaaaggcactttctggttattgtggcttcatggctgccaacctatatgcacgctccata
tttggagaagacgcgcttgcaaatgtcagcattgaaaagccaattcatcttggacctgat
gctccagtcacagggcacataagaattcgtgcaaaaagtcagggaatggcgctaagtctt
ggtgacaagatcaatctctctcagaagaaaactaatttataa
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