Pituophis catenifer annectens (San Diego gophersnake): 139327622
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Entry
139327622 CDS
T11059
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139327622 (SSRP1)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139327622 (SSRP1)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
139327622 (SSRP1)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
139327622 (SSRP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_WDHD1
HMG_box_2
bPH_2
Motif
Other DBs
NCBI-GeneID:
139327622
NCBI-ProteinID:
XP_070813595
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLNRQGVIFKNSKTGKVDNIQASDLAEGIWRRVALGH
GLKLLTKSGHVYKYDGFRETEFDKLSDFFKTHFHVDLAEKDLCVKGWNWGTVKFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEDEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEIAFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKNVTYDEYDGSDEDSHDAYLERMKEEGKIREEHANDSSEDSGEETD
ESFNPVEEEEDVAEEFDSNASASSSSNEGDSDEKKKPAKKAKIVKERKPRKKQSEGKKGK
DPNAPKRPLSAYMLWLNANRDKIRSDSPGMSVTDVSKKAGELWKGMSKEKKEEWERKAEE
AKRDYEKAMKDYSEGGKVDSSKREKAKKKKPDKPGKGRTEKKVATPVKSASKTPLKQLGE
SFKSKEFVSSDESSSGEDKKEDSDEEEIASTPPSSAESASGSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacattggagttcaatgaaatataccaagaagtgaagggatctatgaatgat
ggccgtctgcggctaaaccgtcaaggtgtgatttttaagaacagcaaaactgggaaagtt
gacaacatccaggcctcagatttggcagagggtatctggaggcgagtagcattgggccac
ggcctcaagctgcttactaaaagtggccatgtctacaagtatgatgggttcagagagacg
gagttcgacaaactttcagatttcttcaaaacacactttcatgtagatcttgctgagaaa
gatctatgtgtaaagggctggaactgggggacagtcaaatttggagggcaacttctctct
tttgatattggggagcaaccagtttttgaaatcccgctcagcaacgtgtcccagtgcact
actggcaagaatgaagtgactctggagttccatcagaatgacgatgctgaggtgtcccta
atggaggtccgcttttatgtgccacccactcaggaggatggtgtggatcctgtggaggca
tttgcccagaatgtgttatcaaaggcagatgtcatccaggctactggagatgctatctgt
atcttccgagaactgcagtgcttgactcctcgtggacgctatgatatccgtatctatcct
accttcctgcacctccatggcaaaacgtttgattacaaaatcccatatactactgttctg
cgacttttcttgcttccccataaagatcagcgccagatgttttttgtgatcagcttagac
cctcctataaagcaaggccaaacccgctatcacttccttatactactgttctcaaaggat
gaggatatctccttgaccctcaacatgaatgaggatgaagtcgagaagcgctttgaagga
cggctcaccaaaaatatgtctgggtctctgtatgagatggtcagccgcgtcatgaaagcc
cttgtgaaccgcaagataactgtaccaggcaattttcagggacattctggagcccagtgc
atcacgtgttcctacaaggctagttcgggcctcttgtatcctttggaacgtggcttcatc
tatgtgcacaagccacctgttcacatccgctttgatgagattgcttttgtcaactttgct
cgtgggaccacaacaacacgttcctttgactttgagatagaaaccaagcaagggacacag
tatactttcagcagcatagagagagaagaatatggcaaactctttgactttgtgaatgcg
aagaaactgaacatcaagaatcggggacttaaggagggcatgaagaatgtgacctacgat
gaatatgacggttctgatgaagactcccatgatgcctacttggagcggatgaaagaagag
ggcaagattcgtgaggaacatgcaaatgacagcagtgaggactccggagaggagacggac
gagtcattcaatccagtggaggaagaggaagatgtggcagaagagtttgatagcaatgcc
tctgctagttcttctagtaatgaaggggatagtgacgagaagaagaaacctgccaaaaaa
gccaaaattgttaaagaacggaagccccgcaagaaacagtctgagggtaaaaaagggaaa
gaccccaatgccccaaagaggcctttatctgcatatatgctctggctcaatgctaatcgt
gacaagataagatcagacagtcctggcatgagtgtcactgatgtgtctaagaaagctggg
gaactgtggaaaggaatgtcaaaagagaagaaagaggaatgggagcgcaaagcagaagag
gccaagagggattatgagaaggctatgaaagactacagtgagggaggcaaagtggacagt
tctaagagagaaaaagccaaaaagaaaaagccagataaaccaggaaaaggaagaacagag
aagaaggtagcgacacctgtaaaatctgctagcaagactcctcttaaacagttaggcgag
agcttcaagagcaaggaatttgtgtccagcgatgagagttcctcaggcgaagacaagaag
gaggactctgatgaggaggagatcgccagcacgccacctagttcagcagaatctgcctct
ggctctgattag
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