Paraburkholderia caffeinilytica: DSC91_000006
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Entry
DSC91_000006 CDS
T06448
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSC91_000006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcaf03019
]
DSC91_000006
03110 Chaperones and folding catalysts [BR:
pcaf03110
]
DSC91_000006
03029 Mitochondrial biogenesis [BR:
pcaf03029
]
DSC91_000006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcaf04147
]
DSC91_000006
Enzymes [BR:
pcaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DSC91_000006
Messenger RNA biogenesis [BR:
pcaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DSC91_000006
Chaperones and folding catalysts [BR:
pcaf03110
]
Heat shock proteins
HSP60 / Chaperonin
DSC91_000006
Mitochondrial biogenesis [BR:
pcaf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DSC91_000006
Exosome [BR:
pcaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DSC91_000006
Exosomal proteins of other body fluids (saliva and urine)
DSC91_000006
Exosomal proteins of breast cancer cells
DSC91_000006
Exosomal proteins of colorectal cancer cells
DSC91_000006
Exosomal proteins of bladder cancer cells
DSC91_000006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
AXL48578
LinkDB
All DBs
Position
1:complement(6770..8392)
Genome browser
AA seq
540 aa
AA seq
DB search
MAAKDVKFHDLARHRILTGVNLLADAVKVTLGPRGRNVVLERSFGAPTVTKDGVTVAKQI
ELRDRFENMGAQMVRQVAAKTSDVAGDGTTTATVLAQVIVREGMKYVAAGLNPMDLKRGI
DQAAAVVVEELRKLSRAVTTSKEITQVGAISANADEEIGRIIAEAMEKVGKDGAITLEEG
KSLQSELEVVEGMQFDRGWLSPYFITDPEKQLAVLEEPYILVHDRKISSIHDLLPVLEAV
AKVGKPLLIIAEDVEGEALTTLVVNSLRGILKTVAVKAPGFGDRRKAMLEDIATLTGGLV
ISEETGKQLEKVALEDLGRAKRVEVEKEATTIIDGAGDRKTIDGRIQTIRRQIEETTSDF
DREKLQERIAKLSGGVAVIKVGAATEVEMKERKARVEDALHATRAAVEEGIVPGGGVALL
RARAALKELRGANTDQDAGIRIVLRALEEPLRQIALNAGEEPSVVLNRVLEQSGNFGWNA
ATDTYGDLMEMGVVDPTKVTRTTLQNAASVAGLILTTDAVVAELPKEEARPAVSPPEMEY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgtcaagtttcacgatctcgcccgccaccgcattctgacgggcgtc
aatctgcttgccgacgcggtcaaggtcacgctcggtccaaggggacgcaacgtcgtgctc
gagcgatcgttcggcgcaccgacggtcaccaaggacggcgtcaccgtggcgaagcagatc
gaactgcgcgaccggttcgagaacatgggcgcccagatggtcaggcaggtcgccgcgaag
acctccgatgtcgccggtgatggcacgaccaccgccaccgtgctggctcaggtcatcgtg
cgggaaggcatgaagtacgtcgcggccggcctgaatccgatggacctgaagcgcggcatc
gaccaggccgcggcggtcgtcgtcgaggagctcaggaagctctcgagagccgtgacgacc
agcaaggaaatcacccaggtcggcgccatctcggcgaatgccgatgaggagatcggccgg
atcatcgccgaagcgatggaaaaggtcggcaaggatggcgcgatcacccttgaagaaggc
aagtcgctgcagagcgaactggaggtagtcgaaggcatgcagttcgatcgcggctggctc
tcgccatatttcatcaccgatcccgagaagcaactcgccgtgcttgaggaaccgtacatt
ctcgtgcatgaccggaagatctcgagcatccacgacttgctgcccgtgctggaagcggtc
gccaaggtgggcaagccgttgctgatcatcgccgaggacgtcgagggtgaggccctgacc
acgctcgtggtgaactcgctgcgcggcatcctcaagacggtggcggtgaaggcgccgggc
ttcggcgatcgacgcaaggcgatgctggaagacatcgcgacgctgaccggcggcctggtg
atttcggaggaaaccggcaagcagctcgagaaggtggcgctggaagacctcggacgggcc
aagcgggtggaggtcgagaaggaggccaccacaatcatcgacggcgcgggtgaccgcaag
acgatcgatggacgcattcagacgatccggcgccagatcgaagagacgactagcgacttt
gacagggagaagttgcaggagcgcatcgcgaagctgtccgggggcgtcgcggtgatcaag
gtaggggcggccaccgaagtcgaaatgaaggagaggaaggcgcgcgtggaggatgcgctg
cacgccacgcgtgcggccgtcgaggaaggcatcgtgccgggcggcggcgttgcgctgttg
cgcgctcgcgcggcgctcaaggaactacggggcgccaacaccgaccaggatgccggcatc
aggatcgtgctgcgcgctctggaggaaccgctgcggcagatcgcgttgaacgcgggcgaa
gagccctcggtcgtgctcaaccgggtgctggagcagtccggcaacttcggctggaacgcg
gctaccgatacctatggcgacctgatggagatgggcgtggtcgatccaacgaaagtgacg
cgcacgaccctgcagaacgccgcgtcggtcgccgggctgatcctcactacggacgcggtg
gtggcggagttgccgaaggaagaggcccggcccgccgtgtcaccgcccgagatggagtat
tga
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