Paraburkholderia caffeinilytica: DSC91_000122
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Entry
DSC91_000122 CDS
T06448
Name
(GenBank) hypothetical protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf02020
Two-component system
pcaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSC91_000122
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSC91_000122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaf03000
]
DSC91_000122
Transcription factors [BR:
pcaf03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
DSC91_000122
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
GntR
MarR_2
HTH_29
HTH_11
Replic_Relax
HTH_23
MarR
HTH_24
HTH_IclR
wHTH-HSP90_Na-assoc
Sigma70_r4
TrmB
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AXL48645
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Position
1:122125..122760
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AA seq
211 aa
AA seq
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MDDATAGVWIRAAHLGRKIKVEKGSMIYRQGELGFTFYFLLSGRIQIAIFQSDGAEFMLE
MMGPWAMFGESPAMDGFPRIATAIAAEDSELIEFDIRVIKEVIPSCPELAISLMRIVALK
QRILASRMQYLALPKPEMRIGELLGRLAELYGEKREDGTLISVPLTHEQIAAMTGATRVT
VTRALKRLTALGAIELRQRRIWVLDSSKLIG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgctacggcgggcgtgtggattcgcgctgcccatctcggccggaagataaag
gtcgaaaagggcagcatgatctatcgtcagggcgagctcggctttaccttttactttctg
ctgtcaggccgtatccagatcgcaatttttcagagtgacggcgccgagttcatgcttgaa
atgatggggccatgggcgatgttcggcgagtctcctgcgatggacggctttccgcgaatc
gcaaccgccatcgcggctgaggattcggagctgatcgagtttgacatccgggttatcaaa
gaagtcattccgtcctgtccggaactcgccatctccctcatgcgtatcgttgcgctcaaa
cagcgaattctggcgtcccgcatgcaatatctcgcgctcccaaagccggagatgagaatc
ggagagctattggggcggctggccgagctgtatggcgagaagcgggaggacggcacgctg
atatccgtccctctgacgcacgagcaaatcgctgcgatgacgggggcgacccgcgttacc
gtcacacgtgcattgaagcggctgacggcgctcggcgcgattgaactccggcagcgtcgc
atctgggtgctcgactcgtccaaacttatcggttga
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