Paraburkholderia caffeinilytica: DSC91_000171
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Entry
DSC91_000171 CDS
T06448
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaf03000
]
DSC91_000171
Transcription factors [BR:
pcaf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DSC91_000171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
COG3_C
HTH_11
TetR_C_24
HTH_22
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
AXL48676
LinkDB
All DBs
Position
1:171255..171869
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AA seq
204 aa
AA seq
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MNTRDTPLRLTDRKRAAVIEAAIEEFLAAGFDATSMDRIAARASVSKRTVYNHFPSKEAL
FAEILRQLWESSDTGEAPVYSAVHPLRAQLLQLLSKKLSLLNDEAFLSLARVAIAAGIHS
PERARDMVARMGEREEDLTVWIRAAAADGRLKTPDPVFASHQLQGLVKAFAFWPQVTMGQ
PPLSADEQRQVAESAADMFLARYA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccgtgacactcccctccgcctgaccgaccgcaagcgcgccgccgtgattgag
gcggcaatcgaggaatttctcgcggccggtttcgacgcgaccagcatggaccgtatcgcg
gcgcgcgcgagcgtctcgaagcggacggtttacaaccattttccaagcaaggaagcgctg
ttcgccgagatcctgcggcagctgtgggagtcgagcgacacgggcgaggcgccggtttat
tccgccgtgcatccgttgcgcgcgcagttgctgcagcttctgtcaaagaagctgagcctg
ctgaacgacgaggcgtttctgtcccttgcgcgcgttgcgatcgccgcgggcatccattcg
ccggagcgtgcgcgcgacatggtggcgcgcatgggcgagcgcgaagaagacctgacggtg
tggattcgcgcagccgctgccgacggccgcctcaagacgccggacccggtgttcgcttcg
catcaattgcagggcctggtgaaagccttcgctttctggccgcaggtcacgatgggccaa
ccgcctctcagcgcggacgaacaaaggcaagtcgcggaatccgctgccgatatgtttctt
gcgcgctacgcatga
DBGET
integrated database retrieval system
