Paraburkholderia caffeinilytica: DSC91_000414
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Entry
DSC91_000414 CDS
T06448
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00100
Steroid biosynthesis
pcaf00909
Sesquiterpenoid and triterpenoid biosynthesis
pcaf01100
Metabolic pathways
pcaf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
DSC91_000414
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
DSC91_000414
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcaf01006
]
DSC91_000414
Enzymes [BR:
pcaf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
DSC91_000414
Prenyltransferases [BR:
pcaf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DSC91_000414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AXL48846
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All DBs
Position
1:423911..424957
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AA seq
348 aa
AA seq
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MPNPTRAFILGPLLKGVSRSFYLTLRVLPVGMRDPIGLAYLLARAADTIADTALISPEQR
LALLLSLRDQVNGASNDGALFQRMASEVAGQQAQSDEKVLLESLGPALEVLSQLSESDRK
AVRAIVSTLTEGMEFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTGMTYAHM
PGTLKERPETMARRGVRFGKALQITNVLRDCGKDLRIGRCYLPQTMLDQYGLSAQDLLQP
VNSVRARPLMVELVRKALDHFREALDYTVAIPAFSVRLRLACLWPILIGLDTLLLMVDND
AWLDPAKVSKVRRNDVYRIIASSLLLVPSNGLVRQSVETRLKQIEARL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatccgacccgggcctttattctcggcccgctcctgaaaggcgtttcacgctcc
ttctatctcaccctgcgcgtgctgcccgtcgggatgcgcgatccgatcggcctcgcgtac
ctgctggcgcgtgccgccgacacgattgcggacaccgcgctgatctcgcccgagcaacgt
cttgcattgctgctgtcgctgcgcgatcaggtcaacggcgcctcgaacgacggcgcgctg
ttccagcgcatggcttcggaagtggcgggccaacaggcccagtccgatgaaaaggttctg
ctcgaatcgctaggacccgcgctcgaggtgctgtcgcaactgagcgagtccgaccgcaag
gccgtccgcgcgatcgtgtcgacgctgaccgagggcatggaattcgaccttcgcaccttc
cccgacgaacgttccggccagatcgccgcgctgcgcgagtacgacgaactcgaccgctat
acctatctggtggcgggctgcgtcggcgaattctggacaggcatgacctacgcgcacatg
cccggcacgctaaaagagcggcccgagaccatggcgcgccgcggcgtgcgtttcggcaaa
gcgctgcaaatcaccaacgtgctgcgcgattgcggcaaggatttgcggatcggccgctgc
tatcttccgcagacgatgctcgatcaatatggcctaagcgcgcaagatctgttgcagccg
gtcaactccgttcgcgcccggccgctgatggtcgaactcgtgcgcaaggcgctggatcac
tttcgcgaggcgctggactacacggtggcgattcccgcgttttccgtgcgtttgcgtctc
gcctgcctgtggccgattctgattggactggacacgctgctgttgatggtggacaacgac
gcctggctcgatcccgcaaaagtctccaaggtgcggcgcaacgacgtgtatcggatcatc
gcgtcgtcgctgctcctggtgccgtcgaatgggctggtgcgtcagtcggttgagacgcgg
ctcaagcagattgaagcgcgtctttga
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