Paraburkholderia caffeinilytica: DSC91_001111
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Entry
DSC91_001111 CDS
T06448
Name
(GenBank) ABC transporter
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pcaf03012
]
DSC91_001111
Translation factors [BR:
pcaf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
DSC91_001111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ATP-synt_ab
AAA_29
RsgA_GTPase
MeaB
DUF87
RNA_helicase
NACHT
Med15_M
Motif
Other DBs
NCBI-ProteinID:
AXL49335
LinkDB
All DBs
Position
1:complement(1173850..1175529)
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AA seq
559 aa
AA seq
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MISVRNVTLRRGVNVVLDSASVTFTPGEKIGLVGRNGAGKSSFFGLLNGTLHEDGGEFSI
PAAWKMGQVAQEMPETEQSATDFVIDGDTVLLAAQAEVAAAEASDDGMRMAHAYMALHDA
GAHDAPARAQALILGLGFSAAQLSQPVNSFSGGWRMRLQLARALMCPSDLLLLDEPTNHL
DLDALVWLEAWLKRYQGTLVVISHDREFLDAVTQVTVHVDNAKLVRYGGNYSKFEDMRAE
QLVLQQAAVARQADKIAHLQKFIDRFKAKASKAKQAQSRVKALERMEKIAPVLADAEFTF
EFKEPLNVPNPLLSMLDASFGYAAPTGAPPGTPPTVIVRGINRSVLAGQRIGILGANGQG
KSTLVKTVAHELAPIAGEISEGKGLNIGYFAQQELDVLRPLDTPMEHMIRLAKDTPAHMR
APGQSGTEQSLRTFLGTFNFSGDMVHQAVSTMSGGEKARLVLCMIVWQRPNLLLLDEPTN
HLDLATREALGMALNEFEGTVMLVSHDRSLLRAVCDEFWLVTKGGVEPFDGDLDDYQQFL
RDEARRMREQAAGEQKVIA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgtccgtaatgtcacgctgcgccgtggcgtcaatgtcgtactcgacagcgcg
tccgtcaccttcacccccggcgaaaagattggccttgtcggccgcaatggcgccggcaag
tcgtccttcttcggccttctcaacggcacgctgcacgaagacggcggcgagttctcgatt
cccgctgcatggaagatgggccaggtcgcgcaggagatgccggagaccgagcagagtgcg
accgacttcgtcatcgacggtgacactgtactgctggccgcgcaggccgaagtagccgcc
gctgaggccagcgacgacggcatgcgcatggcacacgcctacatggccctgcacgacgcc
ggtgcacatgatgcccccgcacgtgcccaggcgctgatcctgggccttggcttcagtgcc
gcgcagcttagccagccggtcaacagtttctccggcggctggcgcatgcgactgcaactg
gcgcgcgcgctcatgtgcccgtccgacttgctgttactcgacgagccgaccaatcacctc
gacctcgacgccttggtctggctggaagcgtggctcaagcgctatcaaggaaccttggtc
gtgatcagccacgatcgcgaattcctcgacgcggtgacgcaggtgacggtgcacgtcgac
aacgccaagctggtgcgttatggcggcaattacagcaagttcgaagacatgcgcgccgag
caactcgtgttgcagcaggccgcggtggccaggcaggcggacaagatcgcccacctgcag
aaattcatcgaccgtttcaaggccaaggcctcgaaggcgaagcaggcgcagagccgggtc
aaggcgctcgaacgcatggagaagatcgcaccggtgcttgccgacgcggagttcaccttc
gagttcaaggagccgctcaacgtcccgaacccgctgttgtcgatgctggacgcgagcttc
ggctacgcggcgccgaccggcgcaccgccgggcacgccgccgacggttatcgtgcggggc
atcaaccgatccgtgctggccgggcagcgcatcggcattctcggtgccaacggccagggc
aagtccactctggtgaagacggtggcacacgagctggcgccgattgccggcgaaatcagc
gaaggcaaaggcctgaacatcggctacttcgcccagcaggaactcgacgtgctgcgtcct
ctcgatacgccgatggaacacatgatccgccttgccaaggacacgccggcgcacatgcgt
gcccccggccagagtggcaccgaacaatcgcttcgcaccttcctcggcaccttcaacttc
agtggcgacatggtccatcaggcggtcagcacgatgagcggtggcgaaaaggcgcggctc
gtgttgtgcatgatcgtgtggcagcgccccaacctgctgctgctcgacgagcctaccaac
cacctcgacctggccacacgcgaagcgctaggcatggcactcaacgaattcgaaggcaca
gtgatgctggtcagtcacgaccgttccctgctgcgcgcggtatgtgacgagttctggctc
gtcaccaagggtggcgtcgagcccttcgacggcgatctggacgattaccagcagttcctg
cgcgacgaagcccgtcgcatgcgcgagcaggctgccggagagcagaaggtcatcgcctga
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