Paraburkholderia caffeinilytica: DSC91_001272
Help
Entry
DSC91_001272 CDS
T06448
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaf03000
]
DSC91_001272
Transcription factors [BR:
pcaf03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSC91_001272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_8
AAA
AAA_16
AAA_2
AAA_3
PAS_4
PAS
HTH_23
PAS_7
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AXL49449
LinkDB
All DBs
Position
1:1341703..1343724
Genome browser
AA seq
673 aa
AA seq
DB search
MKRFMERFSYERSVAVSTFTSSLAHSNSSRPGVALVSISRLQSLCESVAPRYAGRARFFS
VREGYGAAVTALQAYVDAGAVDVVLAAGSNGAYLRDNLSVPVVMVKVNGFDVLSAITRAT
TGWPGAKIGLVLHETISHELADLSAWLNVGLKQRAYRSIDEVRLAVAGLAAEDCSVIIGP
GMACDFAQQAGLASVFLYSLGAVEEAFERSVELARVSRQKESKRVRLNTIVAHLRDGVAA
FDDAGQLEAVNPAMLDLLGLDRKQDVPAQLTRAVGPLLREALEHDMPVEERIEQIGGRAL
IVNCVPILEQGVRSGSVLTVQDALVAQRIDRSLRTSQRPKHLVARHHLDDLVGSSAALER
VRRLARAGAAHDATVLLSGESGTGKELVAQGIHNASRRRGNPFVAFNCAALPEGLIESEL
FGHEEGAFTGARRGGKPGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMKLGSGR
ATPVDVRVIAATHRDLHALVEQGVFRADLYFRLNLLQIGLPPLRERRGDVAQLARHVLNR
NARQYGLSDAALERVLAFLTPLFEHYAWPGNVRELENLLARAAIYQSDSAGEDWQDLQTV
FPEFGRMRQVAAHVDGALGHAHTPAHTPVDASGRRSPTREDVVRALEQAGGNRAAASRAL
GIGRTTLWRLMRD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttcatggaacgtttcagctacgagcggagcgtcgcagtgtccactttcacg
tcgtccctggcccattccaattccagccgccctggcgtcgccctggtcagtatcagccgc
ttgcaatcgctttgcgagtcggtcgcgccgcgttacgccgggcgggcccggttcttttcg
gtccgggaaggctacggcgccgccgtcacggctttgcaggcctatgtggacgcgggcgca
gtcgacgtcgtgctggcggccggatcgaacggcgcctacctgcgcgacaacctgagcgtg
ccggtcgtgatggtcaaggtgaacggtttcgacgtgctgagcgcgataacccgcgccacg
acgggctggcccggcgcgaagatcggcctcgtcctgcacgaaaccatctcgcacgaactc
gcggacctgagcgcgtggctgaatgtcggcctgaaacagcgcgcctaccgttcgatcgat
gaagtgcgtctcgcggtcgcgggcctcgcggcggaggactgcagcgtcatcatcggcccc
ggcatggcctgcgattttgcccagcaagcaggacttgcgagcgtcttcctgtactcgctg
ggcgcggtcgaagaagcgttcgagcgctcggtcgaactggcgcgcgtgagccgtcagaag
gaatcgaagcgggtccgcctgaacacgatcgtcgcccatctgcgcgacggcgtggccgcg
ttcgacgatgccggtcagctcgaagccgtcaatccggcgatgctcgatctgctcggactc
gatcgaaaacaggacgtcccggcgcaattgacgcgcgccgtcggcccattgctgcgtgag
gcgcttgagcatgacatgccggtcgaggaacgtatcgagcagatcggcggccgcgcgcta
atcgtcaactgtgtgccgatcctcgagcagggcgtgcgttcgggctccgtgctgacggtg
caggatgcgctggtcgcgcagcggatcgaccgctcgttgcgcaccagccagcggccgaag
catctggtcgcgcggcatcatctggacgatctggtcggcagttcggcggcgctcgagcgg
gtgcggcggctcgcacgcgcaggcgcggctcacgacgcgaccgtgctgttgagcggggaa
agcggcaccggcaaggaactggtcgcgcagggcatccacaatgccagccggcggcgcggc
aatccgtttgtcgccttcaactgcgcggcgctccctgaagggctgatcgaaagcgagctg
ttcggtcacgaggaaggcgcgttcaccggcgcgcgccggggcggcaagccgggcctcttc
gaaatcgcccacaccgggacgatctttctcgacgaaatcggcgagatgccggcggcgctg
cagagccggttgctgcgcgtgttgcaggagcgcgaagtcatgaagctcggctccgggcgc
gcgactcccgtcgacgtgcgggtgattgccgccacccatcgcgatctgcacgcgctggtc
gagcagggcgtgtttcgcgcggatttgtatttccggctgaatctgctccagataggactg
ccgccgctgcgcgaaaggcgcggcgacgtcgcgcaactggcgcggcatgtgttgaaccgc
aatgcgcgccagtatggtctgtcggacgccgcgctcgagcgggtgctggcgttccttacg
cctctgttcgagcactatgcgtggcccggcaatgtgcgggaactggaaaatctgctggcg
cgcgcggcgatttatcagagcgattcggccggcgaggactggcaggacctgcagacggtg
tttccggaattcggccggatgcggcaggtggccgcgcacgtggatggcgccctgggtcac
gcccacacccccgcccacacccccgtcgatgcctcaggccgccgctcgcccacccgcgag
gatgtcgtacgcgcgctcgaacaggctggcggcaatcgcgctgcagcaagccgggcgttg
ggaatcggccgcacgaccctctggcggctgatgagagactga
DBGET
integrated database retrieval system
