Paraburkholderia caffeinilytica: DSC91_001322
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Entry
DSC91_001322 CDS
T06448
Name
(GenBank) membrane protein
KO
K03285
general bacterial porin, GBP family
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
DSC91_001322
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
AXL49487
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Position
1:1402271..1403416
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AA seq
381 aa
AA seq
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MNKFVLSGLSLALVGAAGAAHAQSSVTLYGLIDTGLTYTSNSGGSSNFQQASGMLNGNRW
GLRGSEDLGNGLKAIFVLENGFNLSNGKLGQNGREFGRQAFVGLSSDQFGSVTLGRQYDS
VVDYLAPLALNGTQYGGTLAAHPYDNDNLNNSVRINNSVKFQSVNYGGFKFGALYGFSNA
AGSFADSRAYSVGASYAFGGLKFAAGYLQLNGGGSTTNTSGAVASGDSTFNASRQRTYGA
GVNYAFGAANVGLVFTQTQLNNATAISSSASGTTSGFALTGGSARFTNYELNARYAFTPA
WTVSGAYTYTDASLNGASPKYQQITLQSDYALSKRTDVYVEAAYQHVGSVGDSGITADIV
GVSRSSTDSQVVGTVGIRHRF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattcgtattgtcgggcctctcgctcgcactcgtcggcgccgcgggtgccgcc
catgcacaaagctcggtcacgctgtacggtctgatcgatacgggcctgacctacaccagc
aattcgggcggcagcagcaactttcagcaagccagcggcatgctgaacggcaaccgttgg
ggtctgcgcgggtcggaggacctgggcaatggcttgaaggcgattttcgtgctggaaaac
ggcttcaatctgtcgaacggcaagctggggcagaacggccgtgagttcgggcgtcaggcc
ttcgtcggcctgtcgagcgaccagttcggctcggtcacgctgggtcgccagtacgacagc
gtggtcgactatctcgccccgctcgcgctgaacggcacgcaatacggcggcacgctcgca
gcgcacccgtacgacaacgacaacctcaacaactcggtgcgtatcaacaactcggtcaag
tttcagagcgtcaactacggcggcttcaagttcggcgcgctgtacggcttctcgaatgcg
gcgggcagcttcgcggacagccgcgcctatagcgtcggcgcatcgtacgcattcggcggc
ctgaagttcgctgcgggctacctgcaactgaacggcggcggttcgacgaccaacacgagc
ggcgccgtggcaagcggcgactccacgttcaacgcgagccgtcagcgcacttatggcgca
ggtgtgaactatgcgttcggcgcggccaacgtcggtctcgtgttcacgcagacgcaactg
aacaacgcgaccgcgatcagttcgtcggcgtcgggcacgacgagcggcttcgcgctgacc
ggcggcagcgcgcgcttcacgaactatgaactgaacgcacgttacgcattcacgccggca
tggaccgtgtcgggcgcgtacacgtacaccgacgcaagtctgaacggcgcgagcccgaag
taccagcagatcacgttgcagagtgactacgccttgtccaagcgcaccgacgtctacgtt
gaagcggcataccagcacgtgggcagcgtgggcgactcgggcatcacggcggatatcgtc
ggcgtgagccgttcgtcgaccgactcgcaggtggtcggcacggtgggtattcgtcaccgc
ttctaa
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