Paraburkholderia caffeinilytica: DSC91_001488
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Entry
DSC91_001488 CDS
T06448
Name
(GenBank) branched chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf02010
ABC transporters
pcaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSC91_001488
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSC91_001488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_001488
Transporters [BR:
pcaf02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
DSC91_001488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
LytR_C
Motif
Other DBs
NCBI-ProteinID:
AXL49608
LinkDB
All DBs
Position
1:1592310..1593503
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AA seq
397 aa
AA seq
DB search
MIAQTNGRPAAGRVLRQTTIAVSAALAVLAGMASSPAQSQTIKIGVPVPLSGSSANAGTD
ILNGAKLAAAKVNAAGGVLGKQIELVPEDDACDAQTAVQAAQKLVDAGVVAVAGGYCSSA
ALPELTTFHRAGIPYVLDASTNPKLTEMGYDHVFRTIGRDDEQGPFAASFMKNSLHAKRA
AVINDNTTYAKGLADNTVAALKKDGVEVVYDDAITPGQMDYSPTLTHVASLKPDVIYYTG
YFSEAGLLVKEARQLGLKMTLMGGDGTNDPTLMKTAGPAANDMIITTAPLAQFLSGAHSF
VDDYTKAYGQGPGPYSVYEYDAVGVTAKAIADAKSATPAAITAALHKISNYQGATGTIGF
NPKGDRSVAVYITIIVRGDNFAPYQKQDAAGHWMAMK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgattgctcagacgaatggcaggccggccgcgggtcgcgtgctgcgccagacgacaatc
gcggtatccgccgcgctggccgtgctcgccggcatggcttccagtccggcgcaaagccag
accataaagatcggtgtaccggtaccgctatcgggcagttccgccaatgccggcacggac
attctcaacggcgccaagctggccgccgccaaggtcaatgcggcgggcggcgtgctcggc
aagcagatcgagctggtgcccgaggacgacgcctgcgacgcgcagacggccgtgcaggcg
gcacagaaacttgtcgacgccggcgtcgttgcggtggccggcggttactgctccagcgcg
gcgctgccggaattgacgacctttcatcgcgccgggattccctacgtgctggacgcgtcg
accaatcccaagctgactgagatgggctacgaccacgtgttccgcacgattggccgtgac
gacgagcaagggccgtttgcagccagtttcatgaaaaattcgctacacgcgaagcgtgcg
gccgtgatcaacgacaacacgacctatgccaagggtctcgccgacaacaccgtggccgcc
ttgaagaaagacggtgtcgaggtcgtctacgacgatgcgatcacgcccggtcagatggac
tactcgccaacgctcacccatgtcgcctcactgaagccggacgtgatctactacaccggc
tatttctcggaggccggcctgctcgtgaaggaggcgcggcaactgggcctgaagatgacc
ttgatgggcggcgacggcaccaacgacccaacgctgatgaaaacagccggtcccgcggcc
aatgacatgatcatcaccacggcgccgctggcgcagttcctgagcggcgcgcacagcttt
gtcgatgactatacgaaggcttatgggcaaggtccgggaccttattcggtctatgaatac
gacgccgtcggcgtcacggccaaggcgatcgcagacgcgaagtcggcaacgcccgccgcg
atcacggccgccttgcacaagatttcgaactaccagggcgcgaccgggacgatcggcttc
aacccgaagggggaccgcagcgtggcggtgtacatcaccatcatcgttcggggcgacaat
ttcgcgccctaccagaagcaggatgccgcgggacactggatggcgatgaaatag
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