Paraburkholderia caffeinilytica: DSC91_001506
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Entry
DSC91_001506 CDS
T06448
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00260
Glycine, serine and threonine metabolism
pcaf00460
Cyanoamino acid metabolism
pcaf00630
Glyoxylate and dicarboxylate metabolism
pcaf00670
One carbon pool by folate
pcaf00680
Methane metabolism
pcaf01100
Metabolic pathways
pcaf01110
Biosynthesis of secondary metabolites
pcaf01120
Microbial metabolism in diverse environments
pcaf01200
Carbon metabolism
pcaf01230
Biosynthesis of amino acids
pcaf01240
Biosynthesis of cofactors
pcaf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DSC91_001506
09102 Energy metabolism
00680 Methane metabolism
DSC91_001506
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSC91_001506
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DSC91_001506
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DSC91_001506
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DSC91_001506
Enzymes [BR:
pcaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DSC91_001506
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AXL49622
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Position
1:complement(1614502..1615776)
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AA seq
424 aa
AA seq
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MSNPNPFFEESLATRDAAVRGAILKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEYADVIETLALDRIKQLFNAKFANVQPHSGAQANGAVMLALAKPGDTV
LGMSLDAGGHLTHGARPAMSGKWFNAVQYGVNRDTMLIDYEQIEELAQQHKPALLIAGFS
AYPRALDFARLRAIADGVGAKLMVDMAHIAGIIAAGRHQNPVEHAHVVTSTTHKTLRGPR
GGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALQPGFRTYIDNVLANAQA
LGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDTEKPT
VTSGVRLGTPAGTTRGFGVGEFREVGRLIVEVLDALRDHPEGHAATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccgaatcctttcttcgaagaatcgctggccacgcgtgacgcggcggtgcgc
ggcgccattttgaaagagctggagcgccagcagtcgcaagtcgaactgatcgcgtcggaa
aacatcgtatcgcgcgcggtgctcgaagcgcagggctcggtgctgaccaacaagtacgcg
gaagggtatccgggcaagcgctattacggcggttgtgaatacgccgacgtgatcgaaacg
ctcgcgctcgatcgcatcaagcagctcttcaatgcgaaattcgccaacgtgcagccgcat
tccggcgcgcaggccaacggcgcggtgatgcttgccctggcgaagccgggcgacacggtg
ctcggcatgtcgctcgatgcgggcggccacctgactcacggcgccaggccggcgatgtcg
ggcaagtggttcaacgcggttcaatacggcgtgaatcgcgacacgatgctgatcgattac
gagcagatcgaggaactcgcgcagcagcacaaaccggcgctgctgatcgccggcttctcg
gcttacccgcgcgcactggatttcgcacggctgcgcgcgatcgccgacggcgtgggcgcg
aagctgatggtggatatggcgcacatcgccgggattatcgcggcgggccgccatcagaat
ccggtcgagcatgcacacgtcgtcacctcgaccacgcacaagacgctgcgcggtccgcgc
ggcggctttgtgctgacgaatgacgaagacatcgccaaaaagatcaactccgccgtgttt
ccgggcttgcagggcggcccgctgatgcatgtgatcgccggcaaggcggtggcgttcggc
gaagcgctgcaaccgggcttcaggacctacatcgacaacgtgctggccaacgcgcaggca
ctcggcgaagtactgaaagccggcggcgtcgatctggtcacgggcggcacggacaaccat
ctgctgctggtcgatcttcgtccgaagggcctcaaaggcaatcaggtcgagcaggcgctg
gaacgcgcgggcatcacctgcaacaagaacggcattcctttcgacaccgagaagccgacg
gtcacgtccggcgttcgtctcggcacgccggcgggcaccacgcgtggtttcggcgtgggc
gagttccgcgaagtcgggcggctgatcgtcgaggtgctcgacgcgctgcgcgaccacccg
gaaggccatgccgcaaccgaacaacgcgtgcgccgcgagattttcgcgctgtgcgaacgc
tttcccatctactaa
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