Paraburkholderia caffeinilytica: DSC91_002052
Help
Entry
DSC91_002052 CDS
T06448
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaf03000
]
DSC91_002052
Transcription factors [BR:
pcaf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DSC91_002052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_24
HTH_20
MarR
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AXL50027
LinkDB
All DBs
Position
1:2212219..2213166
Genome browser
AA seq
315 aa
AA seq
DB search
MTMRNATLRQLKVFETVARHLSFSRAAEELHLTQPAVSTQVRQLEEHAGLPLFEQLGKKI
YLTPAGTEMLHYSRAIIQQFHEVDEAMSQLKGVSGGKLNVAVISAGDYFFPRLLAEFTRR
YAGVVLNLAVHNRAELLHQLATNQTDLAVMVRPPHETDATNEPFAPHPYVIVAAPTHPLA
HKRNIKMSQLANEAFIVRERGSDTWNSMEEGFAGRLSNLKIAMEIKSTETIKQAVIAGMG
IAFLSAHTISLELQLGHLVVLDVESFPVMLNWYVVHRKNKRLPPVAVAFKRFLMEEGAGL
IEQITRVKELSVYKQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcgcaatgcgactctgcggcaattgaaggtctttgaaacggtggcgcgccac
ctgagcttctcgcgcgccgcggaagaattgcatctgacgcagcccgccgtctccacccag
gtccggcaactcgaggaacatgccggtctgccgctgttcgagcagctcggcaaaaaaatc
tatctgacgccggccggcaccgagatgcttcactacagccgcgcgatcattcagcagttt
cacgaagtcgacgaggcgatgagtcagctcaagggcgtctccggcggcaaactgaacgtc
gcggtgatcagcgccggcgactacttctttccgcgtctgctggcggaattcacgcggcgt
tacgcgggcgtcgtgctcaatctcgcggtacacaatcgcgcggaactgttgcatcaactc
gcgaccaaccagaccgatctcgcggtgatggtgcggccgccgcatgaaaccgacgcgacc
aacgaaccgttcgcgccgcacccgtacgtgatcgtggcggcgcccacgcatccgctcgcg
cacaagcgcaacatcaagatgagccagttggccaacgaggccttcatcgtgcgcgaacgc
ggctcggacacctggaattcgatggaagaaggcttcgccggccgtctctccaatctgaag
atcgcgatggagatcaagagcaccgagacgatcaaacaggcggtgatcgccggcatgggc
atcgcgttcctgtccgcgcatacgatcagtctcgagctgcagctcggccatctggtcgtg
ctcgacgtcgagagctttcccgtcatgctcaactggtacgtcgtgcatcggaagaacaag
cgcctgccgccggttgccgtcgccttcaaacgcttcctcatggaggaaggcgcggggctc
atcgagcagatcacgcgcgtgaaggaattgagcgtctataagcagtag
DBGET
integrated database retrieval system
