Paraburkholderia caffeinilytica: DSC91_002108
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Entry
DSC91_002108 CDS
T06448
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf02010
ABC transporters
pcaf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSC91_002108
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DSC91_002108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_002108
Transporters [BR:
pcaf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
DSC91_002108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AXL50064
LinkDB
All DBs
Position
1:complement(2268848..2269759)
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AA seq
303 aa
AA seq
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MIALAGAVQAAPAIQIGVVLAGSGLDFWAPMSKGMHRAADDLHVELVMRSPSDGTSLGAQ
PNIQLRMLDYLVKSGVAGIVLAPEPLQDVATPVSLAVPTVFVDRSSTDYNAISTVSTDNF
AAGRTAALSLVPVLHKGARIAVLRLAPTISSTTAREEGFLSVAREMEWRVVIAPYVGYQF
RETEARVRKVLSGDIGRLDAVFAPNETTAYGALHVVEEMPVSTRPRLVVFDWRPEFLGAL
ERSTIYADIVQDPYRMGYQAVETLFAALQGHAPRPKLFVDVVTVTRANMNDPAIHAVIAN
YSR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgattgcattggcgggggccgtgcaggccgcgcctgccatccagatcggtgtggtgctc
gcgggctcgggcctggatttctgggcgccgatgagcaagggcatgcaccgtgccgccgac
gatctccatgtcgaactggtcatgcgcagtccttccgacggaacgtcactcggcgcacag
cccaatatccagttgagaatgctcgactacctggtgaagagcggcgtagcgggtatcgtg
ttggcgcccgagccactgcaagatgtggcgacacctgtttcgctcgccgttcctacggtg
ttcgtcgaccggagcagcacggattacaacgcgatttccacggtcagcaccgacaatttc
gcggcaggtagaacggcggccctgagtctggtccccgttctgcacaagggcgccagaatc
gccgtgctgagactcgcgccgactatcagttcgacaaccgcgcgtgaagagggtttcctg
agcgtcgcccgtgaaatggagtggcgcgtggtcattgccccctatgtcgggtatcagttt
cgcgagacggaagcacgggtgcgcaaggttctgtccggcgacatagggcgcctcgacgcg
gtcttcgctccgaacgagacgacggcctacggggccttgcacgtggtcgaagagatgcct
gtcagcactcgtccgcgtctggtcgtattcgattggcgtccggaatttctgggtgcgctt
gagcgcagcacgatatacgcggacattgtgcaggatccctaccgtatgggttatcaggcg
gtcgagacgctgttcgccgccttgcagggtcatgcgcctcgtccaaagctgtttgtcgac
gtggtgacggtgacacgcgcaaacatgaatgatccggcaatacacgccgtgatagccaat
tacagtcgatag
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