Paraburkholderia caffeinilytica: DSC91_002446
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Entry
DSC91_002446 CDS
T06448
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
pcaf
Paraburkholderia caffeinilytica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA_5
AAA_16
AAA
Mg_chelatase
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AXL50306
UniProt:
A0ABQ1MM39
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All DBs
Position
1:complement(2621291..2623159)
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AA seq
622 aa
AA seq
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MFDSTTRSPAAPARVSLAEAVRLSGALMKPGDSAHLDAGAAPTLGDLAECLFFSPGDGRI
WLNDQRMLLLHSAAFGSLRRELIECVGSESARRLLTRAGYASGARDAALVRQRWPEAEGA
SLLAAGTRLHALEGVVKVEPLHFAFDAASGRYDGEFLWHHSSEADEHIAAYGVGNEPACW
MELGYATGYVSGLTGTLVIFREVECRAMGSAVCRVTGRNALRWDDVADDLRYLDWPAVDG
NEGTRESAALHAETTEKAETTEKGGRIRRPAARAASTLDDDGLVGRAAAFVAARDAMKRV
APTDTAVLLTGESGVGKELFAATLHRRSRRAAGPFIAVNCAALPDSLVEAELFGVERGAF
TGAMQSRAGRFERASGGTLFLDEIGSLPYAAQGKLLRVLQEREVERVGGVRTLRVDVRVI
AATNVELREEVKCGRFREDLFYRLNVFPIVIPPLRERRDDIALLIDGFMLQFCREHGRTT
PGLTPRARRTLLNYAFPGNIRELRNMVERGVIAVDDDEPIDLAHLFRHEPLPAAELYSVD
GGILRAEPAVRPASGLTEAAVLGAPVSAQALSQAPISIGEVEAQLLADALSRARGNVSAA
ARLVGLTRAQFAYRMSKRGGKR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattcgaccacacgatcgccggccgctcccgcccgagtttcgctcgcggaagcc
gtgcgtctctcgggtgcgctgatgaaaccgggcgacagcgcgcatctcgacgccggggct
gcgccgacgctcggcgatctggccgaatgcctgttcttctcgcctggcgacggccggatc
tggctcaacgaccagcgcatgctgctgctgcacagcgcggcattcggctccctgcggcgc
gagttgatcgaatgtgtcggcagcgaatccgcgcgccgcttgctcactcgtgccggctat
gcgtcgggcgcacgcgatgcggcgctcgtacggcagcgctggcccgaagccgagggtgca
tcgctgctggcggcgggcacgcgtctgcacgcgctcgaaggcgtggtgaaagtcgagccg
ctgcactttgcgttcgatgccgcgagcggtcgctacgacggcgaatttctctggcatcac
tcgtcggaagcggacgagcatatcgcggcctacggagtcggcaatgagccggcctgctgg
atggagcttggctatgcgaccggttatgtgagcgggctgactggcacgttggtgatcttt
cgcgaggtcgaatgccgggcgatgggcagcgcggtgtgtcgcgtgactgggcgcaacgcg
ctgcggtgggacgacgtcgcggacgacctgcgctatctcgactggccggcggtggacggt
aacgaagggacgcgcgagagtgccgcgttgcatgcggagacgacagagaaggcggagacg
acggagaagggcggacggattcgccgcccggctgcgcgggccgcctccacgctggacgac
gacgggctggttgggcgcgctgccgcttttgtcgcggctcgcgatgcgatgaagcgcgtc
gcgccgaccgacaccgcggtgctgctgaccggcgaatccggcgtaggcaaggaattgttc
gccgcaacgctgcatcggcgcagccgtcgcgcggcgggaccattcatcgccgtcaactgc
gcggcgttgcccgattcgctcgtcgaagccgaattgttcggtgtcgagcgcggtgcgttc
accggcgcgatgcagtcgcgtgcggggcgcttcgagcgcgcgtcgggcggcacgttgttt
ctcgatgagatcggcagcctgccttatgcggcgcagggcaagctgctgcgtgtgctgcag
gagcgcgaggtcgagcgcgtcggtggcgtgcgcacgctgcgggtcgatgtccgcgtgatc
gcggcgaccaatgtcgagttgcgcgaagaggtgaagtgcggccggtttcgcgaggatctg
ttttaccggctcaacgtgtttccgatcgtgattccgccgctgcgcgaacgccgcgacgat
attgcgttgctgatcgacggcttcatgctgcagttttgccgcgagcatggacgcactacg
cctggcctcacgccgcgcgcgcgacgcacgctgctgaactacgcgttcccggggaatatc
cgtgagctgcgcaacatggtcgagcgcggcgtgatcgccgtcgacgatgacgagccgatc
gacctcgctcatctgtttcgccatgagcctttgccggcggccgagctgtattcggtagac
ggcggcatcctgcgcgccgagccggcagtgagaccggcgagcgggttgacggaggctgcc
gtgttgggcgcgccggtgtccgcgcaagcgctctcgcaggcgcccatatcgatcggcgaa
gtcgaggcgcaacttctggccgacgcactgtcgcgtgcgcgcggcaacgtgtcggcggct
gcacggctcgtgggtttgacgcgcgcgcagttcgcttaccggatgtcgaagcgcggcggc
aaacgctga
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