Paraburkholderia caffeinilytica: DSC91_002508
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Entry
DSC91_002508 CDS
T06448
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSC91_002508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_002508
Transporters [BR:
pcaf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DSC91_002508
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
NMT1
Motif
Other DBs
NCBI-ProteinID:
AXL50350
UniProt:
A0ABQ1NBE2
LinkDB
All DBs
Position
1:complement(2700555..2701625)
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AA seq
356 aa
AA seq
DB search
MSADSKIALPRRRFLQAAGTTLLSTAIAAPMVITSRKAMAASNLTVVSWGGNYHAGVEEA
LAKPFEKEFGVHVTLVDTPDLAKVKAQVMTNNVQWDVFDAVGPMAMTGSKNGYWEPLDPA
LFNRSDLIAPMTKDAVPLYGFTGGICWDNNKFPDGKHPQTFAEYFDVKKFPGQRTLRNRA
SETLEIALLADGVAPDKLYPLDVERAFKALNRIKPFIGNWVDQTPQTVTLVETGQVDFSY
TYSTRVKAAQEANKPINFSFKQNLIGLEYLVVLKNSPNKANAMKFVQFALRPDRQAALMN
ELGNTPASRSALPIIKPEVRKWLSDPANKMNVVSNDAWWADHYDELTLRFKEWVLG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgattccaaaatcgccttgccccgccgccgattcctgcaagccgcgggcacg
actctgctttcgaccgccatcgccgcgccgatggtcattacttcacgcaaggccatggcc
gcgagcaacctgacggttgtgagctggggtggcaactatcatgcgggcgtggaagaagca
ctggcgaaaccattcgagaaagaattcggcgttcacgtgaccctggtggataccccggat
ctcgcgaaggtgaaggctcaggtcatgacgaacaatgtccaatgggacgtgttcgacgcg
gtgggcccgatggcgatgaccggctcgaaaaacggttattgggagcctcttgatccggcg
ctgttcaatcggagcgacctgatcgcgccgatgacgaaagacgcggttcccctctatggt
ttcaccggcggcatctgctgggacaacaacaaattcccggatggcaagcacccccagact
tttgcggaatacttcgacgtcaagaagtttccagggcagcggacgctgcgcaaccgtgcc
agcgagacgctggaaatagccttgctcgccgacggtgtcgcgccggacaaactgtacccg
ctggacgtcgagcgggcgtttaaggcactcaaccgtatcaagccgttcatcggcaactgg
gtagaccagacgccgcaaaccgtcacgctcgtcgagaccggccaggtcgatttcagctac
acctactcgacgcgcgtcaaagcggctcaggaagccaacaaacccatcaacttctcgttc
aagcagaatctgattggtcttgaatatctggtggttctgaagaattcgccgaacaaggca
aacgccatgaagttcgtgcaatttgcgctgcgcccggaccggcaagccgcgttgatgaat
gagctcggcaatacgccggcgagtcgcagcgccttgcccataattaagccggaagtccgg
aagtggctgtccgaccctgcgaacaagatgaacgtcgtcagcaacgacgcatggtgggcc
gatcactacgacgagttgaccttgcggttcaaggagtgggtgctgggctga
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