Paraburkholderia caffeinilytica: DSC91_002568
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Entry
DSC91_002568 CDS
T06448
Name
(GenBank) selenocysteine-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pcaf03012
]
DSC91_002568
Translation factors [BR:
pcaf03012
]
Eukaryotic type
Elongation factors
DSC91_002568
Prokaryotic type
DSC91_002568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_2
SelB-wing_3
GTP_EFTU_D2
bact_SelB_WH_2nd
MMR_HSR1
SRPRB
GTP_EFTU_D3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AXL50387
LinkDB
All DBs
Position
1:complement(2767634..2769550)
Genome browser
AA seq
638 aa
AA seq
DB search
MIVGTAGHIDHGKTSLVKALSGVDTDRLKEEKARGISIELGYAYVPLENGDVLGLIDVPG
HEKLVHTMTAGASGIDFALLVIAADDGVMPQTREHLAIVELLGIRRGAIALTKIDRVDVE
RLQEVHGEIAAFLSGGVLQDAPVFETNALSDDDPGVAALKAHLHAAAAAWRMKRDDGLFR
LAIDRVFTLSGQGTIVTGTVVSGRVAVGDTMLLAPKNQPVRVRSIHAQNRPAENGRAGER
CALNLAGIEKSAIDRGDWVVDPRLSQASERIDVMLTLLADAPLMLEHWAPLHVHLGTQHQ
VAHVALLDGQTLGAGQSARVQLVFERPVCALPGDRFVVRNAQANRTVGGGHVLDPFAPSR
KRRAPERLAWLDALQVMLDTGALDPLLARAPHGLSRSLLERLTGMQAATLALPYDTRVVE
VPGSNDALLIADTSWRALHARLTTALKQYHERSPDELGPDISRLRRIAAPLVDDALWRVL
VDDAAARGEIVRRGPWLHLPGHAVTLDEADRALAAALLPALKEGRFDPPWVRDLANAHGV
SEDRVRQLLRKLARQGELFQVVRDLFYHHEVIRELALIASSEAQKNAGTVAAAPFRDITG
LGRKRAIQLLEFFDRVGYTRFRRGLHLMRTDSRWLDLL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagggacggccgggcatatcgaccacggcaaaacgagtctggtgaaagcgctg
tcgggcgtcgatacggatcgtctgaaggaagaaaaggcgcgtggcatttcgatcgaactg
ggctatgcgtacgtgccgctcgaaaacggcgacgtgctcggcctgatcgacgtgccgggc
cacgaaaagctcgttcatacgatgaccgcgggcgcgagcggcattgatttcgccctgctc
gtgattgccgccgacgacggcgtgatgccgcaaacgcgcgaacatctggcgattgtggag
ctgctcgggatcaggcgcggcgccatcgcgctgaccaaaatagaccgtgtcgatgttgag
cggctgcaggaagtgcatggcgagatcgcggcgtttctgagcggcggcgtgctgcaggat
gcgccggtgttcgagaccaacgccctaagcgacgatgatcctggcgtggccgcgctcaag
gcgcatttgcacgcagcggcagcagcgtggcgcatgaagcgcgacgacggtctgttccgt
ctcgcgatcgaccgggttttcacgctctcgggccagggcacgatcgtgacaggaaccgtg
gtgtcgggacgcgtggcagtcggtgacacgatgctgctcgcgccgaaaaatcagccggtg
cgcgtgcgcagcattcatgcgcagaatcgtccggccgagaatggacgggcaggcgagcgc
tgtgcgttgaacctggcgggcatcgagaagagcgcgatcgatcgcggcgactgggtcgtc
gatccgcggctgtcgcaagcatcggaacgtatcgacgtcatgctgacgttgctcgccgat
gcaccgttgatgctggagcattgggcgccgctgcacgtgcatctgggcacgcagcatcag
gtggcccatgtcgcgttgctcgatggccagacgctcggcgcggggcagtcggcgcgcgta
cagctcgtgttcgaacggccggtgtgcgcgctgcctggcgatcgctttgtcgtgcgcaat
gcgcaggcgaatcgcacggttggcggcggtcatgtgctcgatccgtttgcgccttcgcgc
aagcgtcgcgcgcctgagcggctggcgtggctcgatgcgcttcaggtcatgctcgacact
ggcgcgctggatccgctgctcgcaagggcgccgcatggattgtctcgttcgttgctggag
cgactgacgggtatgcaggcagccacgcttgcgttgccatatgacacgcgtgtcgtggag
gttcccggcagtaacgacgcattgttgatcgccgatacgtcatggcgcgccttgcatgcg
cggctgactacggcgctaaagcagtaccacgagcgctcgccggatgagctcggccctgac
atatcgcgcttgcggcgaatcgcagcacctctcgtcgacgacgcattgtggcgcgtgcta
gttgacgacgcggcggcgcgtggagagatcgtcagacgcggaccgtggctgcatctgccg
ggccacgcggtaacgctcgacgaggcggatcgcgcgcttgcggcagcgctgctgcccgcg
ctgaaggaaggacgtttcgatccgccctgggtgcgtgatctggcaaacgcacatggcgta
tccgaagaccgcgtgcggcagttgttgcgcaaactcgcacggcagggcgagctttttcag
gttgtgcgcgacctgttttatcaccatgaggtgattcgtgaactggctttgatcgcgagt
tccgaagcgcaaaaaaatgcgggtacggtagcggccgcaccgtttcgcgatatcacaggg
ctcgggcgaaagcgtgcgatccagcttttggagttcttcgaccgcgttgggtatactcgc
ttccgccgtggcctgcatctgatgcgcacggatagtcgctggctcgatctgctttga
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