Paraburkholderia caffeinilytica: DSC91_002880
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Entry
DSC91_002880 CDS
T06448
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00020
Citrate cycle (TCA cycle)
pcaf00190
Oxidative phosphorylation
pcaf00650
Butanoate metabolism
pcaf00720
Other carbon fixation pathways
pcaf01100
Metabolic pathways
pcaf01110
Biosynthesis of secondary metabolites
pcaf01120
Microbial metabolism in diverse environments
pcaf01200
Carbon metabolism
Module
pcaf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcaf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcaf_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DSC91_002880
00650 Butanoate metabolism
DSC91_002880
09102 Energy metabolism
00190 Oxidative phosphorylation
DSC91_002880
00720 Other carbon fixation pathways
DSC91_002880
Enzymes [BR:
pcaf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DSC91_002880
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
FAD_binding_3
HI0933_like
Pyr_redox_2
FAD_oxidored
GIDA
Pyr_redox_3
Lycopene_cycl
NAD_binding_8
ThiF
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AXL50590
UniProt:
A0ABQ1MUX3
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Position
1:complement(3128470..3130245)
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AA seq
591 aa
AA seq
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MAAIKNSLPRRKFDVVIVGAGGSGMRASLQLARAGLSVCVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPNAVYELEHFGMPFDRNADGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQQNVAAKTQFFVEWMALDLIRDADG
DVLGVTALEMETGDVYILEGKTTLFATGGAGRIFAASTNAFINTGDGLGMAARSGIALQD
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGVGPNKDHVLLDLSHIGAETIMKRLPSIREIAMKFANVDCIKEPIPVVPTIHYQ
MGGIPTNINGQVVGTSRDHKEVVNGFYAVGECSCVSVHGANRLGTNSLLDLVVFGRAAGN
HIVKHVKDIKEHKPLPADAGDFSLARLNKLDKSTSGEYSQTVATDIRSTMQAHAGVFRTS
KLLAEGVERIREVADRVDNIYLKDKSKVFNTARIEALEVENLIEVARATMVSAEARKESR
GAHAQNDFEHRDDENWLRHTLWFSEGDRLDYKPVQMQPLTVESVPPKARTF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatcaagaattctctgccgcgtcgcaagtttgacgtggttatcgtcggcgca
ggcggctcggggatgcgcgcttcgctgcaactcgcgcgcgccggtctgtcggtttgcgtg
ctgtccaaggtgttcccgacgcgttcgcacacggtcgctgcccaaggcggcatcggcgct
tcgctcggcaacatgagcgaagacaactggcattaccacttctacgacacgatcaagggt
tccgactggctcggcgaccaggacgcgatcgagttcatgtgccgtgaagcgccgaacgcc
gtgtacgagctcgaacacttcggcatgccgttcgaccgtaacgccgacggtacgatttac
caacgcccgtttggcggccataccgccaattacggcgaaaagccggtgcaacgcgcttgc
gcggcggctgaccgtaccggtcacgcgctgctgcacacgctgtaccagcagaacgtggcg
gccaaaacgcaattcttcgtcgaatggatggcgctggatctgatccgcgacgccgacggc
gacgtgctcggcgtgaccgcgctggaaatggaaaccggcgacgtttatatcctcgaaggc
aagaccacgctgttcgctacgggcggcgcgggccggatcttcgcagcatccacgaacgcg
ttcatcaacaccggtgacggcctgggcatggctgcgcgttcgggtatcgcactgcaagac
atggaattctggcaattccaccccaccggcgtggccggcgcgggcgtgctgattaccgaa
ggcgtgcgcggtgaaggcggcattctgcgcaactcgaacggcgagcgtttcatggagcgc
tacgcgccgacgctgaaggatctggcaccgcgcgacttcgtttcgcgttcgatggaccag
gaaatcaaggaaggccgcggtgtgggtccgaacaaggaccacgtgctgctcgacctgtcg
cacatcggcgctgagacgatcatgaagcgtctgccgtcgatccgcgaaatcgcgatgaag
ttcgcgaacgtcgactgtattaaagagccgattccggttgtgccgaccatccactatcag
atgggcggtatcccgacgaacatcaacggccaggtcgttggcacgtcgcgggaccacaag
gaagtcgtcaacggtttctacgcagtgggcgaatgctcgtgcgtgtcggtgcacggcgca
aaccgtctcggcacgaactcgctgctcgacctggtggtgttcggccgcgcggccggcaac
cacatcgtcaagcacgtgaaggacatcaaggagcacaagccgctgccggccgacgcgggc
gatttctcgctggctcgtctgaacaagctggacaagtccacgtcgggcgaatactcgcaa
accgttgcgaccgatatccgttccacgatgcaggcgcacgcgggcgtgttccgtacgtcg
aagctgctggccgaaggtgtcgagcggatccgcgaagtggctgatcgtgtcgacaacatc
tatctgaaagacaagtcgaaggtgttcaacacggcgcgtatcgaagcgctggaagtggag
aacctgatcgaagtggcccgcgccacgatggtttccgccgaagcccgcaaggaaagccgc
ggcgcgcacgcgcagaacgatttcgaacatcgcgacgacgaaaactggctgcgccatacg
ctgtggttcagcgaaggcgatcgcctcgactacaagccggttcagatgcaaccgctgacc
gtcgaatcggtgccgccgaaagcgcgtaccttctaa
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