Paraburkholderia caffeinilytica: DSC91_003075
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Entry
DSC91_003075 CDS
T06448
Name
(GenBank) YD repeat protein
Organism
pcaf
Paraburkholderia caffeinilytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
AXL50736
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All DBs
Position
1:3362118..3365570
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AA seq
1150 aa
AA seq
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MRLIDALAARRALLRPFVLFFFVLISWFAAPHARAMECPMAYAKAGAFPTDPQCSLKAAA
ADFGGMGGYICGNPSTIAAYCGGASTDGVTVGPVPAEGAIAAEGDLPDGQPGGAGGCAAD
ATAGCGGSTSGADPVNLFTGQFGLVAHDLHVADTIALDLARVYRSSTYDASGSPVAGVFG
VGTTFAYDSHLVFSAADDRGVRSRVELYLPSGVRVPFTPRAGTTTAWDDLTSPGEYYRAG
ISGGSAGMTLTLRDGRVQQFAMVNGLYRLSRVQDRNGNAVVIARDSASGAITGITSPNGR
KLTFTTVAGARGTRLVSRVTDPLNRQVSYTYDSQDRLTQVTDAGGGVWKYGWDSKSRLVS
VTDPEGNLQVASTYDDNDRVVAQKLADGSTFGLAYTVTGGNVTKTEVTDRRGSIRRLEFD
ANGRVVRNTYPAGQPEQQVQTFTYDATGRVTNLTAGDRQYTYGYDGNGNRVSEADQFGTL
IQRTFDSYSQLLTDAQAGDWQRGVATVYTYDTRGNLLTITDRLGNRTTQTNDSQGRPLTV
TDALRGVTKFTYTGADLTSVTDPLNRTTQFTSDAVGRVTAVQDPLGNTTKRTLDALDRTT
ELTDALNGVTRFTWDRNGHLLSQADPKGVTTRYAYNAIGRPVSKTDPLGHNETYTWNSAG
QLASVTDRRGQLRVYTYDAAGRLQSTYFMPDGNPKAKPVRSLGYSRDAFGRLQDTSDSGN
DRAPGGTSAYYDSVTGKLSQWFDSSANQQGRVWFRYAADSRDLARIEMKDAVVTYSRDAG
HRVTQIQYEVNGEAPRTFGYTYDALGRRSQATLANGMTAIYTWDAASQLTGITYKRADGS
VLGDLTYGYDPGGRRTKAGGSLAKVDLPQAVNDAQYNAANQLTRWSGRTMAYDLNGNLAS
DGANQYSWNPQDLLAGMTGGVTASFSYDIFGRRRDQTVNGRRTQSFWLGDELAFTIADGD
YAHRVRQFSPYPESGLDELTYRRIGDDAGQDRYVLRDGNNNVIALTDANQQSQTQYRFEP
YGKTTPTGVADPNAQQYTGRENDGTGLYYYRNRYYSPQTGRFISEDPIGWASGQTNAYAY
VNGNPVSNSDPYGLAPGDKWYGYNDRTFQRWAHGEKAIMGRAPNENFTKDDIRDLWDQWQ
QLGCPVPGSR
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcatcgatgccctcgcggcgcgtcgcgcgctgctgcgcccgttcgtgctgttt
ttcttcgtgctgatctcgtggttcgccgcaccgcatgcgcgcgccatggaatgtccaatg
gcctacgccaaagccggcgcctttccgaccgacccgcaatgttcactgaaggcggctgcg
gccgatttcggcggcatgggcggctacatctgcggcaacccgtcgaccattgccgcgtat
tgcggcggcgcttcaactgacggcgttaccgtcggacccgtgccggccgagggcgccatt
gccgcagagggcgatcttcccgacggccagcccggcggcgccggcggctgcgccgctgac
gcgacggccggctgtggcggcagcacgtccggggccgacccggtgaacctgttcaccggc
cagttcgggctggtcgcgcatgacctgcatgttgcggacacgatcgcgctggatctcgcg
cgggtctatcgcagcagtacctatgacgcatccggaagtccggtggcaggcgtgttcggc
gtggggacgacgtttgcgtacgacagccatctggtgttcagcgcagcggatgaccgtggt
gtgcggtcacgcgtcgaactgtacctgccgagcggtgtgcgggtgccgttcaccccgcgc
gcaggcaccacgacggcgtgggacgacctgacgagcccgggcgaatactatcgcgcgggg
atcagtggcggcagtgcgggtatgacgcttacgctgcgcgacggccgggtgcagcagttc
gcaatggtcaacggactataccggttaagccgcgtgcaggaccgcaacggcaatgcggtc
gtgatcgcccgcgacagcgcgagcggggcgatcaccggcatcaccagccccaacggccgc
aagctcacgttcacgacggtggccggtgcgcgcggcacacggctcgtctcgcgcgtgacc
gatccgctgaaccgccaggtcagctacacctacgacagccaggaccgcctcacccaggtc
acggacgcaggcggcggcgtgtggaaatacggctgggacagcaaatcacggctggtgagc
gtcaccgaccccgagggcaatctgcaggtcgccagcacctacgacgacaacgaccgcgtg
gttgcgcaaaagctcgcggacggcagcacgttcggcctcgcctatacggtcacgggcggc
aacgtgacaaagaccgaagtgacggaccgccgcggcagcattcgccgtctggagttcgac
gcgaacggacgggtggtgcgcaacacctatccggctggccagccggagcagcaggtgcag
actttcacgtacgacgcgaccggccgcgtgacgaacctcacggcaggagatcgccagtac
acctatggctacgacgggaacggcaaccgcgtcagtgaagccgaccagttcgggacactc
attcaacgcaccttcgacagttacagccagctgctcaccgatgcgcaggccggcgactgg
cagcggggcgtcgccacggtctacacgtacgacacgaggggcaacctgctgaccatcacg
gaccgcctcggcaaccgcaccacgcagacgaacgacagccagggccgcccgctgacggtg
accgacgcgctcaggggcgtgacgaagttcacgtataccggcgcggatctgaccagcgtc
accgatccgctgaaccgcaccacgcagttcacgtccgatgccgtgggtcgcgtgacggcg
gtgcaggacccgctgggcaacacgaccaagcgcacgctcgacgcgctggaccgcacgact
gagctcaccgatgcactgaacggcgtgacccgtttcacgtgggatcgcaacggccacctg
ctcagccaggccgacccaaagggcgtgacgacccgttacgcctacaacgcgatcggccgg
ccggtgagtaaaaccgacccgctgggccacaacgagacgtatacgtggaacagcgcgggg
cagctggcgagcgtgaccgaccgcaggggccagttgagggtgtacacgtatgacgcggcg
ggccgcctgcagtcgacgtatttcatgccggacggcaatccgaaggcgaagccggttcga
agtctgggatacagccgggatgcctttggccggctgcaggatacgagcgatagcggcaat
gaccgggcacccggcggtacgagcgcttactacgacagtgtcaccggcaaactcagccag
tggttcgattcgtcagcgaaccagcaggggcgcgtctggttccggtacgcggccgacagc
cgggatctggctcgcatcgagatgaaggatgcggtggtgacctacagccgcgacgccgga
caccgtgtcacgcagatccagtacgaggtgaacggcgaggcgccgcgtactttcggctat
acctacgatgcactcggccgacgcagtcaggcgacgctcgccaacggcatgacggcgatc
tacacatgggatgccgccagccagttgacgggcatcacatacaaacgcgccgacggcagc
gtgctgggcgatctgacgtacggctacgatccgggcggccgtcgcacgaaggcgggcggg
agtctcgcgaaggtggacctgccgcaggcggtgaacgacgcacagtacaacgcggccaac
cagctcacgcgctggtcgggcaggacgatggcttacgacctgaacggcaacctggccagc
gatggtgcgaaccagtacagctggaacccgcaggacctgcttgccggcatgaccggcggt
gtcacggcgagcttcagctatgacatcttcgggcgtcgccgggaccagacggtcaatggt
cgccggacgcagtcgttctggcttggcgacgaactggccttcacgattgcagacggcgac
tacgcgcaccgtgtgcgtcagttctcgccgtatccggagagcgggctggatgagctgacg
taccggcgtatcggggacgatgcgggtcaggaccgctatgtcctgcgcgatgggaataac
aacgtgatcgcgctgacggatgcgaaccagcagagccagacgcagtaccggtttgagccg
tacgggaagacgacgccaaccggggtggccgatccgaacgcgcagcagtacacgggccgg
gagaacgatgggacggggctgtattactaccgcaataggtactacagtccgcaaacgggc
aggttcatcagcgaggatccgataggctgggccagtgggcagacgaacgcgtatgcttac
gtcaacggcaatccggtctccaattccgatccctacgggctggctccgggcgacaaatgg
tacggctataacgatcgaacattccagcggtgggcgcatggtgagaaagctattatgggc
cgagcgcccaacgaaaacttcaccaaagatgacattcgagatctatgggaccagtggcaa
cagctcggctgtcctgtgcctggtagtcgctaa
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