Paraburkholderia caffeinilytica: DSC91_003142
Help
Entry
DSC91_003142 CDS
T06448
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaf03000
]
DSC91_003142
Transcription factors [BR:
pcaf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
DSC91_003142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AXL50789
UniProt:
A0ABQ1NK08
LinkDB
All DBs
Position
1:3435201..3436760
Genome browser
AA seq
519 aa
AA seq
DB search
MIEIIGPLANPAAATLDGSGEKSAPLQKQLIERLQQAILTGRLPAGTLLPSSRLLAAEMG
VSRNTVVIAYEHLAAVGYVVADKKGTRVSPLSSPSARGETRTPPAAPEVAYAARVEQFAA
TRTHADNTLPLTPGTPALDRFPLAAWRRSFERSMERALPLALGYGDPVGEPALRDAIAAH
LRMARGVRCEGSQVVITEGAQEALNLCVRLFTNPRDIAWVEDPGYRGAKAAFTLGDLSMR
PMPVDPEGIAVPPDAWRTHPPKLIYTSPAHQYPTGAVLSVARRLELIAQARRCGAWLIED
DYDGEFRHTGEPIASMQGLVEDAPVLYVGSFSKTMFPALRIGFVVLPRTIAAHTAVAVQE
MLRGGHRLEQLALAHFIDSGEFGRHLGRMRRLYRERQQALRDALTAHFAPSQILGGNCGM
HLTLRLPSHIADRTLAQRALAERLNPRALSGFALQQREETNGLVIGYGSTPADQLRLAVR
VLAKLVGEAASGSASESTSGAGSRSASSSANSSTSRRAV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagatcattggcccgcttgccaatcccgccgccgcgaccctcgacggtagcggc
gaaaagtccgcgccgctgcaaaaacagctcattgagcggttgcagcaggcgatcctcacg
gggcgtttgccggcggggacgctgttgccgtcgtcgcgtttgctggcggcggagatgggc
gtgtcgcgcaacacggtggtgatcgcgtacgagcatctggccgcggtcggttatgtcgtg
gccgacaaaaagggcacgcgcgtgagtccgctttccagtccgtcggcacgcggtgaaacg
cggaccccgccggccgcgccggaggtcgcctacgcggcgcgggtcgagcaattcgcggcg
acccgcactcacgccgacaacaccttgccgctgacaccgggcacgcccgcactggaccgc
tttccactggccgcctggcggcgctctttcgaacggtcgatggaacgcgcgttgccgctc
gcacttggctacggcgacccggtgggcgagccggcgctgcgcgacgcgattgctgcgcat
ttgcggatggcgcggggcgtgcgctgcgagggttcgcaggtggtcatcaccgaaggcgcg
caggaagcgctgaacctgtgcgtgcggctgttcacgaatccgcgcgacatcgcgtgggtg
gaagatccgggctatcgcggcgccaaagcggctttcaccctcggcgatctgagcatgcgg
ccgatgccggtcgatcccgaaggcatcgcggtgccgcccgacgcgtggcgcacgcatcct
ccgaagctgatctacacgtcgcccgcgcatcaatatccgaccggggcggtgttgtcggtg
gcgcgccggctggaactgatcgcgcaggcgcgccgctgcggcgcgtggctgatcgaagac
gactacgacggagaattccgccataccggcgagccgatcgccagcatgcaggggctggtc
gaggacgcgccggttttgtacgtcggctcgttcagcaaaacgatgtttccggcgctgcgc
atcggctttgtggtgctgccgcgcacaatcgccgcgcacacggctgtcgcggtgcaggag
atgctgcgcggcgggcatcgtctggagcaactggcgcttgcgcatttcatcgacagcggc
gaattcgggcggcatctgggccgcatgcggcgtttgtaccgggagcgccagcaggcgctg
cgcgatgcgctcaccgcgcatttcgcgccgtcgcagattctgggcggcaattgcggcatg
catctgacgcttcgcttgccgtcgcacattgccgatcgaaccctcgcccaacgcgcgctt
gccgagcggctcaatccacgtgcgctgtcgggttttgcattgcagcagcgcgaggaaacg
aacgggctggtgatcggctacggcagcacgccagccgaccaactgaggctggctgtccgc
gtcttggccaagcttgtgggcgaggcggcgagcgggtcggcgagcgagtcgacaagcggg
gcgggaagtaggtcggcaagcagctcggcaaacagctcgacatcccggcgagccgtgtaa
DBGET
integrated database retrieval system