Paraburkholderia caffeinilytica: DSC91_003482
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Entry
DSC91_003482 CDS
T06448
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf02010
ABC transporters
pcaf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSC91_003482
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DSC91_003482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_003482
Transporters [BR:
pcaf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
DSC91_003482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AXL51026
UniProt:
A0ABQ1NEA2
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All DBs
Position
2:complement(169095..170057)
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AA seq
320 aa
AA seq
DB search
MSHRIRRRMLAAAVLATATGALPFSSAFAQTAPARKPKVALVMKSLANEFFLTMETGAKD
YQKHNASQFDLITNGIKDETDTANQIRIVEQMIVSKVDAIVLAPADSKALVPVVKKAVDA
GIIVVNIDNRLDPDVLKSKDLNVPFVGPDNRKGAQKVGDYLARKLKAGDEVGIIEGVSTT
TNAQQRTAGFKDAMQSVGAKVVSVQSGEWEIDKGNAVASAMLNEYPNLKALLAGNDNMAI
GAVSAVRAAGKQGKVLVVGYDNINAIRPMLKDGRVLATADQYAAKQAVFGIDTALKAINE
HKKQSQLSGVVETPCDLVAR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcgcattcgccgccgcatgctggcggccgctgttctcgccaccgctaccggc
gctttgccgttttcctccgccttcgcgcaaaccgcgcccgcccgtaagccgaaggtcgcg
ctggtgatgaagtcgctcgccaacgagttcttcctgaccatggaaaccggcgcgaaggac
taccagaaacacaacgcctcccagttcgacctgatcaccaacggcatcaaggacgagacc
gataccgcgaaccagatccgcatcgtcgaacagatgatcgtgtcgaaggtcgatgcgatc
gtgctggcgccggctgattcgaaggcgctggtgccggtcgtcaagaaggcggtcgacgcg
ggcatcatcgtcgtgaacatcgacaaccggctcgatccggacgtgctcaagtcgaaagac
ctgaacgtgccgttcgtcggcccggacaaccgcaagggcgcgcagaaggtcggcgactat
ctggccagaaagctgaaggcgggcgatgaagtcggcattatcgaaggcgtgtcgaccacc
accaacgcgcagcaacgcacggcgggcttcaaggacgccatgcagagcgtcggcgccaag
gtcgtgtcggtgcaatcgggcgaatgggaaatcgacaaaggcaacgcggtggcgtcggcc
atgctcaatgagtatccgaacctgaaggcgctcctggccggcaacgacaatatggcgatc
ggcgcggtctcggccgtacgggcggcaggcaagcagggcaaggtactggtggtcggctac
gacaacatcaacgcgatcaggccgatgctcaaggacggccgcgtgctcgccaccgccgac
cagtacgccgccaagcaggccgtgttcggtatcgacaccgcgctgaaggcgatcaacgag
cacaagaagcaatcgcagttgtccggcgtggtcgaaacgccgtgcgatctggtggccaga
taa
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