Paraburkholderia caffeinilytica: DSC91_003879
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Entry
DSC91_003879 CDS
T06448
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
DSC91_003879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
PsbU
HHH_6
DUF460
Motif
Other DBs
NCBI-ProteinID:
AXL51286
LinkDB
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Position
2:599505..601865
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AA seq
786 aa
AA seq
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MTETVALKIVQRIAAELSVQPRQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLE
ERLLYLRELEDRRAAIIASIDEQGKLTDELRTAIEGADSKQVLEDLYLPYKPKRRTRAQI
AREAGLQPLADALLANPLLDPQTEAAAYVDAEKGVADIKAALDGARDILSEQFGETADLL
GKLRDYMFNQGVVSSRVVEGKENAEEEKFRDYYDYAETIRTVPSHRALALFRGRNAGVLM
VKLGLGEELDAQVPHPGEALIARHFGIANQNRPADKWLADVCRWCWRVKVQPHIENELLT
NLRDEAEHEAIRVFARNLKDLLLAAPAGPKAVIGLDPGMRTGVKVAVVDRTGKVLATDVI
YPHEPRRDWDGSIAKLARICAQTQAELISIGNGTASRETDKLASELIARHPEFKLQKIVV
SEAGASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASVALLARVSGLNATLARNIVDYRDANGPFPSREH
LRKVPRLGDKTFEQAAGFLRINNGENPLDRSSVHPEAYPVVERMLAKISKHVGEVLGNRD
ALRGLSPAEFVDERFGLPTVRDILLELEKPGRDPRPEFKTATFREGVEKVSDLTPGMVLE
GVVTNVAAFGAFIDVGVHQDGLVHVSAMSTKFIKDPHEVVKAGQIVKVKVLEVDVKRQRI
ALTMRLDDEFGAAAAPRSGGGAQQDRGGSSRSGGGSGGGRGAQQQRSREPEAGGAMAAAF
AKLKQK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaccgtagcactcaagatcgtacagcgcatcgccgccgaactgtccgtccag
ccgcgccaggtcgcggccgcggtgcaacttctcgacgaaggagcgactgttccgttcatc
gcccgctaccggaaggaagtgaccgacaatctcgacgacacgcaactgcgcaatctcgag
gagcgcctgctgtatctgcgcgagctggaagaccggcgcgccgcgatcatcgcgagcatc
gacgagcagggcaagctcaccgacgaactgcgcaccgcgatcgaaggcgccgacagcaag
caggtgctggaagacctgtatctcccgtacaagccgaagcgccgcacgcgcgcgcagatc
gcccgcgaagccggcctgcagccgctcgccgacgcgctgctggccaatcccctgctcgac
ccgcaaaccgaggccgccgcctatgtggacgccgagaaaggcgtcgccgacatcaaggcc
gcgctcgacggcgcgcgcgacatcctctccgaacagttcggcgaaaccgcggatctgctc
ggcaagctgcgcgactacatgttcaaccagggcgtggtgtcgtcgagagtggtcgaaggc
aaggaaaacgcggaagaagagaaattccgcgactactacgactacgcggaaaccatcagg
accgtgccgtcgcatcgtgcgctggccctgttccgcggccgcaatgcgggcgtgctgatg
gtcaagctgggtttgggcgaagagctcgacgcgcaggtgccgcatccgggcgaagcattg
atcgcccgccacttcggcatcgccaatcagaaccgcccggccgacaagtggctcgccgac
gtgtgccgttggtgctggcgcgtgaaggtgcagccgcacatcgaaaacgaactgctgacc
aatctgcgcgacgaggccgaacacgaagcgattcgcgtgttcgcacgcaacctgaaggac
ttgctgctggccgcgccggcgggaccgaaggccgtgattggcctcgatccgggtatgcgc
accggcgtgaaagtcgcggtggtcgatcggaccggcaaggtgctcgccaccgacgtgatt
tatccgcacgagccgcgccgcgactgggacggctcgatcgcgaaactggcgcgcatctgc
gcacagacgcaggctgagctgatcagtatcggtaacggcacggcgtcgcgcgaaacggac
aagctggcgagcgaattgatcgcgcgtcatcccgagttcaagctgcagaagatcgtcgtc
tcggaagccggcgcgtcggtgtactcggcctccgaactcgcggcgaaggaattcccggac
atggacgtgtcgcttcgcggcgccgtgtcgattgcgcgccgcctgcaggatccgctggcg
gaactggtgaagatcgaacccaaggcgatcggtgtgggtcagtaccagcacgacgtgaat
cagcgcgaactggcccgctcgctcgacgcggtggtcgaggattgcgtgaacgcggtcggc
gtggatgccaatacggcgtcggtcgcattgctggctcgcgtgtcgggtctgaacgcgacg
ctggcgcgcaacatcgtcgactatcgcgatgcaaacggcccgttcccgtcgcgcgaacac
ctgcgcaaggtgccgcgccttggcgacaagactttcgaacaggcagccggtttcctgcgc
atcaacaacggcgagaatccgctggatcgctcgtcggttcacccggaagcgtatcccgtc
gtggagcgcatgctcgcgaagatcagcaagcatgtcggcgaagtgctcggcaatcgcgac
gcgctgcgcggcctgtcgccggcggaattcgtcgacgaacgtttcggcctgccgaccgtg
cgcgacattctgctggaactcgaaaaaccgggccgcgacccgcgccccgagttcaagacc
gcgaccttccgcgaaggcgtcgagaaagtcagcgatctgacgccgggcatggtgctcgaa
ggcgtcgtgacgaacgtggcggccttcggtgcgttcatcgatgtcggcgtgcatcaggac
ggtctggtgcacgtgtcggccatgtcgacgaagttcatcaaggacccgcacgaagtggtc
aaggctggccagatcgtcaaggtgaaggtgctggaagtcgacgtgaagcgccagcgtatc
gcgctgaccatgcgcctggacgacgagttcggcgcggcggccgcgccgcgcagcggcggt
ggcgcccagcaggatcgtggcggctccagccgctcgggtggtggtagcggcggcggacgc
ggcgcgcagcaacagcgctcgcgtgagccggaggcaggcggcgccatggccgccgcattc
gccaagctcaagcagaagtaa
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