Paraburkholderia caffeinilytica: DSC91_004100
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Entry
DSC91_004100 CDS
T06448
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00071
Fatty acid degradation
pcaf00362
Benzoate degradation
pcaf00650
Butanoate metabolism
pcaf01100
Metabolic pathways
pcaf01120
Microbial metabolism in diverse environments
pcaf01200
Carbon metabolism
pcaf01212
Fatty acid metabolism
Module
pcaf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DSC91_004100
09103 Lipid metabolism
00071 Fatty acid degradation
DSC91_004100
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DSC91_004100
Enzymes [BR:
pcaf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DSC91_004100
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
Pyr_redox_2
Pyr_redox
NAD_binding_7
F420_oxidored
FAD_binding_3
ApbA
Motif
Other DBs
NCBI-ProteinID:
AXL51435
LinkDB
All DBs
Position
2:834464..836584
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AA seq
706 aa
AA seq
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MTLNPSAEVVTRELRGKVLLVTIDHAPVNALSADVRRGLLAAIEAADADKAVEAVLIVGA
GRNFIAGADIREFGKPPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRLA
VDGAKLGLPEVQLGLLPGAGGTQRTPRLIGAEAALDLILSGRHAGAKEALALGLIDRLGS
SDDILAEGLAYTQELLAGHAPVRRTRDAAALSDRTASLAAVATARAETTKKSRGLFSPLK
IVDAVEAAIEQAFEDGLRLERKLFLACIDSPQRAGLIHAFFAEREVLKAPETRDAKPRAL
NRIGVVGGGTMGAGIAVAVLDAGLPVTMIERDDASLARGRAHIEKVYDGLIAKGRMSAEK
KTDVMTRWHGSTSYDALADADLVIEAVFEDLSVKQAVFAELDRVCKGGAVLATNTSYLDI
DAIAASISRPADVIGLHFFSPANIMKLLEVVVPKQVSTDVVATAFELAKKLRKTPVRAGV
CDGFIGNRVLAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWATRK
RRAATRNPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGSPDPEVEAIIDAERERA
GITPRTFTDEEIVRRYMAAMINEGANVVYEGIALRPLDVDVTFLYGYGFPRYRGGPMKYA
DTVGLATVLADIREFAKEDPLFWRASPLLVDLVERGADFASLNQAA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaacccttccgccgaggtggtgacgcgtgaattgcgcggcaaagtcctgctg
gtgaccatcgaccacgcgccggtgaacgccttgtccgccgacgtgcggcgcggcctgctc
gccgccatcgaagcggcggatgccgacaaggccgtcgaagcggtgctgatcgtcggcgcc
gggcgcaacttcatcgcgggtgcggacatccgtgagttcggcaaaccgcctgtgccgccg
tcgctgccggacgtttgcaaccgtatcgaagcctgcacgaagccggtggtggccgccatt
cacggcgctgcgctcggcggcggcctggaagtagcgctcgccgcgcactaccggcttgcc
gtggacggtgcgaagctcggtttgcccgaagtgcagctcggcctgctgccgggcgcgggc
ggcacacagcgcacgccgcgcctgatcggcgcagaggccgccctcgacctgatcctgagc
ggccgccatgccggcgcgaaagaagcgctcgcgctcggcctgatcgaccggctcggcagc
agcgacgacatcctcgccgaaggactcgcctacacgcaggaactgctggccggccacgca
ccggtacgccgtacgcgcgacgccgcggcgctcagcgaccgcacggcgagcctcgccgcc
gtcgccacggcacgcgcggaaacgacgaagaaatcgcgcggcctgttctctccgctaaaa
atcgtcgatgccgtagaagccgccattgaacaggctttcgaagacggcctgcggctcgaa
cgcaaactgttcctggcatgcatcgacagcccgcagcgcgccggcctgattcacgcgttc
tttgccgagcgcgaagtactcaaggcaccggaaacgcgcgatgccaaaccacgcgcgctg
aaccggatcggcgtggtgggcggcggcacaatgggcgcgggcatcgccgtcgcggtgctc
gatgcgggcctgccggtgacgatgatcgaacgcgacgacgcgtcgctcgcacgcggccgc
gcgcacatcgaaaaggtgtacgacggcctgatcgccaaaggccgcatgagcgcggaaaag
aaaaccgacgtgatgacgcgctggcatggcagcacctcgtacgatgcgctcgccgacgcc
gatctggtgatcgaagccgtcttcgaagacctgtcggtgaaacaagccgtgttcgccgaa
ctcgatcgcgtttgcaaaggcggcgcggtgctcgccaccaacacctcgtatctcgacatc
gacgcgatcgctgccagcatctcccgccctgcggacgtcatcggcctgcacttcttctcc
cctgccaacatcatgaagctgctggaagtcgtggttccaaagcaggttagcaccgacgtg
gtcgccaccgccttcgaactcgcgaagaagctgcgcaagacgccggtgcgggcgggcgtg
tgcgacggcttcatcggcaaccgcgtgctggcggtgtatcgcagcgccgctgacgcgatg
atggaagacggcgcgtcgccatatcagatcgatgccgcggtgcgtgcgttcggttttccg
atgggtccgttccaggtggtcgatctggcgggcggcgatatcggttgggccacgcgcaag
cgccgcgcagccacgcgaaatcccgcagcgcgctacgtgcagatcgccgatcgactttgc
gaacgcggttggttcggccagaaaaccggtcgtggtttttatctgtatcccgaaggttca
cgcagcggcagcccggaccctgaggtcgaggccatcatcgacgccgagcgtgaacgcgcc
ggcatcacgccgcgcactttcaccgatgaagaaatcgtgcgccgctacatggccgcgatg
atcaacgaaggcgccaatgtcgtgtacgaaggcatcgcgctgcggccgctcgacgtcgac
gtgaccttcctctatggctacggctttccgcgctatcgcggcggcccgatgaaatacgcc
gatacggtgggcctcgccacggttctcgccgacattcgcgagttcgccaaagaagacccg
ctgttctggcgagcgtcgccgctgctggtcgatctggtcgaacgcggcgccgatttcgcg
agcctcaatcaggcagcctga
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