Paraburkholderia caffeinilytica: DSC91_004121
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Entry
DSC91_004121 CDS
T06448
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSC91_004121
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcaf01007
]
DSC91_004121
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcaf03016
]
DSC91_004121
Enzymes [BR:
pcaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DSC91_004121
Amino acid related enzymes [BR:
pcaf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DSC91_004121
Transfer RNA biogenesis [BR:
pcaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DSC91_004121
Prokaryotic type
DSC91_004121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
B5
tRNA_bind
FDX-ACB
VapB_antitoxin
Motif
Other DBs
NCBI-ProteinID:
AXL51456
LinkDB
All DBs
Position
2:complement(856889..859324)
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AA seq
811 aa
AA seq
DB search
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVEDLRPAAPQTSKIVVGQVLEVVKHPDAD
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPSAEEGGAPFAIKLSKLRGVE
SQGMLCSARELKLSEDHSGLMILPEDTPIGQDIRETLNLDDTVFEIKLTPNKADCLSVFG
VARETSAITGAALRPLEIKPAEVKLNETLPVKISAPDLCGRFSGRVIRGVNARAKSPQWM
VQRLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWGRKGETLKLLNGNT
VELDETVGVIADEQHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRSRKYNFST
DAGHRFERGVDYATTVEHIERITQLILDICGGQAGPVDDQIVNVPKREPVKMRVSRANRI
IGIKIDAEEIAQIFTRLGLTFERDGDTFSVMPPSYRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRPTNETQRSIHVIRHALAARDYAETVNFSFVDAEWEADFAGNDQPVRLLNP
IASQLSVMRTTLFGSLIDVLRTNLNRRAADRVRVFEAGRVFLHDPSIKAGELTVEGFAQP
KMIGGLAYGPVLEEQWGAPTRTVDYFDVKGDLEAVLAPAVARFVKAEHPALHPGRSARIE
LNGRAVGWIGELHPRWMQKYDLPHAPILFEIEAEALMQRVLPAPADVSKFPPVRRDIAVV
VDQKIEVQALLDELQKAQSEAACKTVQKVVLFDEFRPKSNTSGGLAAHEKSLAFRVTLQD
TGGTLQDETVDLAIQTLVERLARVYGARLRG
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcccggaatcctggctgagaacctttgtcgatccgcaactgacgaccgatgaa
ctgtcgcacgcgttgacgatggcgggtctcgaagtcgaagacctgcggccggccgcgccg
cagacttcgaagatcgttgtcggccaggtgctggaagttgtcaagcacccggacgccgat
aaactcaacgtgtgtcaggtcgacgccggcacgggcgcgacgctgaacatcgtgtgcggt
gcgccgaatgtcgcaccgggcatcaaggtgccagtcgcgctggttggcgcgcaactgccg
tcggccgaagagggcggcgcgccattcgcgatcaagctctcgaagctgcgcggcgtggaa
agccagggcatgctgtgctcggcgcgcgaactgaagctctcggaagatcatagcggcctg
atgatcctgccggaagatacgccgatcggccaggacatccgcgaaacgctcaatctcgac
gacacggttttcgaaatcaagctgacgccgaacaaggccgactgcctgtcggtgttcggc
gtggcacgcgaaacttcggccatcaccggcgccgccctgcgtccgcttgaaatcaagccg
gccgaagtgaagctcaacgaaacattgcccgtcaagatctcggcgcccgatctgtgcggc
cgcttctcgggccgcgtgatccgcggagtgaatgcgcgcgcgaagtcgccgcaatggatg
gtgcagcgtctcgaacgctcgggtcagcgcagcatctccgcgctcgtcgacatctcgaac
tatgtgatgctcgaactgggccgtccgtcgcacgtgttcgatctggacaagatccacggc
ggcatggacgtacgttggggccgcaagggcgagacgctcaagctgctgaacggcaacacc
gtcgaactcgacgaaaccgtcggcgtgatcgccgatgagcaacacatcgaaagccttgcc
ggcatcatgggcggcgacagcacggccgtcacgctcgataccaccaacatctatctcgag
gccgcgttctggtggccggatagcattcgtggccgctcgcgcaagtacaacttctcgacc
gatgcaggtcatcgtttcgaacgtggcgtcgattacgcgaccaccgtcgaacacatcgaa
cgcatcacgcaactgatcctcgatatctgcggtggccaagccggcccggtcgacgatcag
atcgtcaacgtgccgaaacgtgagccggtgaagatgcgcgtctcgcgtgcgaaccgcatc
atcggcatcaagatcgacgccgaagaaatcgcgcagattttcacgcgcctcggcctgacg
ttcgaacgcgacggcgatacgttttcggtgatgccaccgtcgtaccgattcgatatcgaa
atcgaagaagacctgatcgaagaagtcgcgcgtatctacggcttcgaaaagatccccgca
cgtccgccggtcgcgaccagcgaaatgcggccgaccaacgaaacgcagcgctcgattcac
gtgatccgccatgcgctcgccgcgagggactacgccgagacggttaacttcagctttgtg
gatgccgagtgggaggcggacttcgccggcaacgaccagcctgttcgtctgctgaatccg
attgcgagccagttgtcggtcatgcgcaccacgctgttcggcagcctgatcgacgtcctg
cgcacgaacctgaaccgtcgcgcggctgatcgcgtgcgcgtgttcgaagctggccgcgtg
ttcctgcacgatccgtcgatcaaggcaggtgaattgaccgtcgaaggtttcgcgcagccg
aagatgatcggcggcctcgcctacggtcccgtgctcgaagagcagtggggtgcgccaacg
cgcacggtcgactacttcgacgtgaagggcgacctggaggccgtgctcgcgccggcagtc
gcgcgcttcgtgaaagcggagcatccggcattgcacccgggccgcagcgcgcgtattgaa
ctgaatggccgcgcagtgggctggattggcgaattgcatccgcgctggatgcaaaaatat
gatttgccgcatgcaccgattctctttgaaatcgaagcggaagcattaatgcagcgcgta
ttgccggccccggcggacgtgtctaaattcccgccggtgcggcgcgatattgcggtggtc
gtcgatcagaaaatcgaggtgcaggcgctgctggacgagctccagaaggcccagtccgaa
gcggcctgcaagaccgtccagaaggttgtgctttttgacgaattccgtccaaaatcaaac
acttccggtggtctggccgctcatgagaaaagccttgcgttccgtgtgaccttgcaagat
actggcgggacccttcaggatgaaacggtcgatctggccattcaaactctggtggaacgt
ctggctcgagtatatggcgcacggttgcgtggataa
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