Paraburkholderia caffeinilytica: DSC91_004260
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Entry
DSC91_004260 CDS
T06448
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf03030
DNA replication
pcaf03430
Mismatch repair
pcaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSC91_004260
03430 Mismatch repair
DSC91_004260
03440 Homologous recombination
DSC91_004260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcaf03032
]
DSC91_004260
03400 DNA repair and recombination proteins [BR:
pcaf03400
]
DSC91_004260
Enzymes [BR:
pcaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSC91_004260
DNA replication proteins [BR:
pcaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSC91_004260
DNA repair and recombination proteins [BR:
pcaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSC91_004260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AXL51549
UniProt:
A0ABQ1L8M8
LinkDB
All DBs
Position
2:1007022..1007756
Genome browser
AA seq
244 aa
AA seq
DB search
MRQLILDTETTGLNARTGDRILELGCVEMVNRRLTGNNLHFYINPERDSDPGALAVHGLT
TEFLSDKPKFAEIADQFRDFIQDAELIIHNAPFDIGFLDAEFALLGLPPVKTYCGEIIDT
LARAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GDSHGGGDTHAPRIAIDSLNLVVIAASDDELAEHQAVLDGLDKAVKGTSVWRLEPAPAPD
EQTT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaactcatcctcgataccgaaaccaccggcctgaatgcacgaaccggcgaccgg
atcctcgaactcggttgcgtcgaaatggtgaaccgccggctcacgggcaacaacctgcat
ttctacatcaatccggaacgcgacagcgacccgggcgcactggcggttcacgggctgacc
accgagttcctgagcgacaagccgaagttcgccgagatcgccgatcaatttcgcgacttc
attcaggacgcggaactgatcattcacaacgcgccgttcgacatcggctttctcgatgcc
gaatttgcattgctgggtttgccgccggtgaaaacctactgcggcgagatcatcgatacg
ctcgcgcgcgccaagcagatgttcccgggaaaacgcaattcgctcgacgcgctgtgcgac
cgcttcggcatcagcaacgcacaccgcaccttgcacggcgcactgctcgactcggaactg
cttgccgaggtctatctggcgatgacgcgcggccaggaaagcctcgtcatcgacatgctc
ggcgattcgcacggtggcggcgatacgcacgcaccgcgcatcgcgatcgattcgctgaat
ctggtcgtgatcgccgcaagcgacgatgaactcgccgaacatcaggccgtgctcgacggt
ctcgacaaagcggtcaaaggcacgagtgtgtggcgcctcgaaccggctccggccccggat
gagcaaactacttaa
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