Paraburkholderia caffeinilytica: DSC91_004314
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Entry
DSC91_004314 CDS
T06448
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcaf03009
]
DSC91_004314
Enzymes [BR:
pcaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DSC91_004314
Ribosome biogenesis [BR:
pcaf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSC91_004314
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Fascin
Motif
Other DBs
NCBI-ProteinID:
AXL51589
UniProt:
A0ABQ1L8S5
LinkDB
All DBs
Position
2:complement(1055557..1056537)
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AA seq
326 aa
AA seq
DB search
MIEIDDSAAGQRIDNFLLRVCKGVPKSHIYRILRSGEVRVNKGRIDAQYRLELGDLVRVP
PIRVAQPNEAIAQAVVPSADFKIIFEDDHMLVIDKPAGVAVHGGSGVAFGVIEQMREARP
QAKFLELVHRLDRETSGILMLAKKRSALVNLHDQIRENKMDKRYYACVHGEWASDWGRRR
AVKEPLHKYLTADGERRVRVQADGLASHTVFNLIDRWPGYALLEAELKTGRTHQIRVHLQ
HLELPIVGDAKYGDFALNKALARANAKPGLKRMFLHAYRLKLTHPATGAPVQFEAPLPAE
CRSFVAQLNELRESQNGSNPETTPHG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagatcgacgacagtgcggccggacagcgcattgataacttcctcttgcgcgtc
tgtaagggcgtgccgaaaagccatatttaccgcatcctgcgtagcggggaagtgcgcgtc
aataagggccggatagacgcgcagtaccgcctcgaactgggcgatctggtgcgcgtgccg
cccattcgtgtcgctcaaccaaacgaggcgatcgcccaggcggtcgtgccgagcgccgat
ttcaagattatttttgaagacgatcacatgctcgtgatcgacaagccggccggcgtggcg
gtccacggcggcagcggcgtcgcgttcggcgtgatcgaacagatgcgcgaagcgcggccg
caggcgaaattcctcgaattggtgcatcggctggaccgcgagacgtccggtatcctgatg
ctcgccaagaagcgctccgcgttggtcaatctgcacgaccagattcgcgagaacaagatg
gataagcgctactatgcgtgcgtccacggcgaatgggcgagcgattggggccgccgccgc
gcggtcaaggagccgctgcacaagtatttgaccgcggacggcgagaggcgcgtgcgcgtc
caggcagacggcctcgcgtcgcacacggtcttcaatctgatcgatcgctggccggggtac
gcgctgctcgaggcggaactgaagaccggtcgcacgcatcagattcgcgtccatttgcag
catctggagctgccgatcgtcggcgatgccaaatacggcgacttcgcgctcaacaaagcg
ctggcccgcgccaacgccaaacctggcctgaaacgcatgtttctgcacgcataccgcctt
aagctgacgcacccggcgaccggcgcaccggtgcagttcgaggcgccgctgccggccgaa
tgccgcagtttcgttgcgcagctcaatgaattacgtgaatcacaaaatgggtcaaacccg
gagacgacaccgcatggctag
DBGET
integrated database retrieval system
