Paraburkholderia caffeinilytica: DSC91_004469
Help
Entry
DSC91_004469 CDS
T06448
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf03030
DNA replication
pcaf03430
Mismatch repair
pcaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSC91_004469
03430 Mismatch repair
DSC91_004469
03440 Homologous recombination
DSC91_004469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcaf03032
]
DSC91_004469
03400 DNA repair and recombination proteins [BR:
pcaf03400
]
DSC91_004469
Enzymes [BR:
pcaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSC91_004469
DNA replication proteins [BR:
pcaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSC91_004469
DNA repair and recombination proteins [BR:
pcaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSC91_004469
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Cho_C
GIY-YIG_UvrC
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
Motif
Other DBs
NCBI-ProteinID:
AXL51703
UniProt:
A0ABQ1L5C7
LinkDB
All DBs
Position
2:complement(1219330..1220484)
Genome browser
AA seq
384 aa
AA seq
DB search
MSEQFLPEPAQDVPIVFVDLETTGGSTSEHRITEIGVVEIGPAGVSRWSSLVDPQQPIPS
FIQQLTGITNAMVRGAPTFDVIAPALFERLNGKLFVAHNASFDRGFLRGEFRRAGLAFDP
DVLCTVRLSRALFPAEKRHGLDALVERHGLVPSDRHRALADADLIWQFWQRLHSGLVPPD
VLQAQIERTTRRYRLAGDITEDLLDTAPAGCGVYAFYGEGDLPLYVGRSVRVRQRLRSHL
TGERRSSKDVRLAQQVRRVEWRATGGELGAMLAEAQWIATLRPGHNRVPRVMKGDPVDAP
WPFEGPIVFEEREEASHARAFHVVDRWRYLGHALSLEQAAALHASSADGPFELSTYRLLQ
SHLARGLRVMPLSISSGTPVPSLA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagtttctgccggaaccggcccaagatgtgccgatcgtcttcgtcgacctt
gaaaccaccggcggctcgaccagcgagcatcgcatcaccgaaatcggcgtggttgaaata
ggaccggccggcgtgtcgcgttggagcagtctggtcgatcctcagcaaccgattccttcc
ttcatccagcagctcactggcatcacgaacgcgatggtgcgaggcgcgcctactttcgat
gtcatcgcgccggcactattcgagcgcctgaacggcaaactgttcgtcgcgcacaacgcc
agtttcgatcgcggttttctgcgcggggagtttcgccgggccggactcgcgttcgatccg
gatgtgctgtgcaccgtgcggctgtcgcgcgctttgtttccggcggaaaagcgtcatgga
ctcgacgcattggtggagcgtcatggcctcgtcccatccgaccgccaccgcgcgctcgcc
gacgccgatctgatctggcagttctggcaacgtctgcatagcggtctcgtgccgccggac
gttctgcaggcacagatcgagcgcacgacgcggcgctaccggcttgccggggatatcact
gaagatctgctcgacaccgcaccggccggttgcggtgtctatgcgttttatggggaaggc
gatctgccgctgtatgtcgggcgaagcgtgcgtgtgcgccagcggctgcgctcgcacctg
acgggtgagcggcgttcgtcgaaggacgtgcggctcgcacaacaagtgcggcgggtcgag
tggcgcgccactggcggcgagttgggcgccatgctcgcggaggcgcaatggatcgcgaca
ttgcgtcccggtcacaaccgggtgccccgcgtcatgaagggcgatccggtggatgcgccc
tggccgttcgaaggtccgatcgtatttgaggagcgcgaagaagcgtcgcacgcgcgcgct
tttcacgttgtcgaccggtggcgttaccttgggcatgcgctctcgctcgaacaggcggcg
gcgctgcatgcttcgagcgcagacggaccgttcgagctgtccacttaccgtcttctgcag
agccatcttgcgcgtggcttgcgcgtcatgcccttgagcatctcgagcggcacgcctgtg
ccgagcctggcttga
DBGET
integrated database retrieval system
