Paraburkholderia caffeinilytica: DSC91_004539
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Entry
DSC91_004539 CDS
T06448
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcaf03009
]
DSC91_004539
Enzymes [BR:
pcaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DSC91_004539
Ribosome biogenesis [BR:
pcaf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DSC91_004539
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AXL51753
LinkDB
All DBs
Position
2:1285283..1285993
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AA seq
236 aa
AA seq
DB search
MNLESILFTQGFGSRRQCRALIGDGRVSICGAVRTDADADFPTHDSTLCFSVDGVVWPYR
EHAYLLLNKPAGYECSRDPQHHLSVFSLLPPQFAERGVQCVGRLDQDTTGLLLLSDDGKF
VHMFTSPKRKVPKLYIATTRHPIDDAQLSALRNGVLLHGEPRPIVAVDVEARGEHALALT
VMEGKYHQVKRMIAAAGNRCEALHRERIGGLALPATLAVGAWQWLDETDLGSLRSG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgaaagcatcctcttcactcaaggtttcggctcgcgccgccaatgccgggcg
ctgatcggcgacggtcgcgtgagcatttgcggcgctgtccgcaccgatgccgacgccgat
ttcccaactcatgacagcacgctctgcttcagcgtggacggggtcgtctggccgtatcgc
gagcacgcctatctgctgctgaacaagcctgccggctacgagtgttcgcgcgatccgcag
catcacctgagcgtattcagcctgctgccgccgcagttcgccgaacgcggcgtgcaatgc
gtgggccgcctcgatcaggacacgaccggcctcctgctgctctccgacgacggcaagttc
gtgcacatgttcacgtcgccgaaacgcaaggtgccgaagctgtacatcgcgaccacgcgc
catcccatcgacgacgcccagttgagcgccttgcgcaacggtgtcctgctgcacggcgag
cccaggccgatcgtcgccgtcgatgtggaggcgcgcggtgagcacgcgctggccctcacc
gtgatggagggcaagtatcaccaggtcaagcggatgatcgcggccgccggcaaccgttgc
gaagcgctgcatcgcgagcggatcggcggactcgcgttgcccgcgacactggcggttggc
gcgtggcaatggctcgacgaaaccgacctcggatctttacggagcgggtaa
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integrated database retrieval system
