Paraburkholderia caffeinilytica: DSC91_004791
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Entry
DSC91_004791 CDS
T06448
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaf03000
]
DSC91_004791
Transcription factors [BR:
pcaf03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSC91_004791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_3
HTH_IclR
LacI
TetR_N
HTH_31
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AXL51949
LinkDB
All DBs
Position
2:1546699..1547538
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AA seq
279 aa
AA seq
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MMLSQVEEMRDQLRPSERKLADYVIEAPREVLDLSMTEVAARAGVSQPTIARFCHALGFS
GFREFKIRLAQGIAAEVPAVYRDVRPDEPTPGVAAKVLDRTIGALIQVRNNLSSDSVAAA
IALLAQGRRIEFYGAGGSGIAALDVQHKFFRLGMPSVAYSDPHTFLMSAALLGEGDVVVA
ISNTGRTRDIVDAVKLALATGAKVIAITHGNSPLARLATVGLFANVDEDTDIFSPMTSRV
SHLAIGDILAVGVALSRGPELVEKMAQAKEVITRRRIDP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtctcaggtggaagagatgcgcgatcagttgcggccgtccgagcgtaagctg
gccgactacgtgatcgaggcgccgcgcgaggtgctggatctgtcgatgacggaagtggcc
gcgcgcgccggcgtcagccagccgaccatcgcacggttctgtcacgcgctcggtttttcg
ggctttcgtgagttcaaaatacggctcgcgcaggggattgctgcggaagtgcccgccgtc
tatcgcgacgtgcggccggacgagccgacgccgggtgtggccgcaaaggtgctcgaccgg
accatcggcgcgctgattcaggtgcgcaacaatctgtcgtcggatagcgtcgcagcggcg
atcgcgctgctggcgcaggggcggcgcatcgagttttacggcgcgggtggttccggcatc
gcggcgttggatgtgcagcacaagttctttcgcctcggcatgccgagcgtcgcgtattcg
gacccgcatacatttttgatgtcggcggcgctgctgggcgaaggcgatgtagtggtggcg
atttcgaacacgggccgcacgcgcgatattgtcgatgcggtgaagttggcgctggcaacc
ggcgcgaaagtgatcgcgatcacccacggtaattcgccgttggcgcggcttgctactgta
ggcttgttcgccaacgtcgacgaagacacggatatcttttcgccgatgacctcacgggtc
tcgcatctggcgattggcgacattctggcggtgggtgtggctttgagccgggggccggag
ctcgtcgaaaagatggcgcaagcgaaggaagtgatcacccgaagaaggatcgatccgtaa
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