Paraburkholderia caffeinilytica: DSC91_004794
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Entry
DSC91_004794 CDS
T06448
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf03030
DNA replication
pcaf03430
Mismatch repair
pcaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSC91_004794
03430 Mismatch repair
DSC91_004794
03440 Homologous recombination
DSC91_004794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcaf03032
]
DSC91_004794
03400 DNA repair and recombination proteins [BR:
pcaf03400
]
DSC91_004794
Enzymes [BR:
pcaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSC91_004794
DNA replication proteins [BR:
pcaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSC91_004794
DNA repair and recombination proteins [BR:
pcaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSC91_004794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Spore_SspJ
Motif
Other DBs
NCBI-ProteinID:
AXL51952
LinkDB
All DBs
Position
2:complement(1549756..1550877)
Genome browser
AA seq
373 aa
AA seq
DB search
MQLRLDALEAHLAKGLAGLYVVYGDEHLLAQEASDRIRATARAAGFTDRSVFTVERGFDW
SSLLGASQSMSLFGDRQLVELRIPSGKPGKEGADALKALAAAVNDDVLTMITLPRLDAAT
QKSAWFTALSDAGVALKIDPVERAQLPNWVGQRLAAQGQRVVAGEEGRRALAFIAERVEG
NLLAAHQEIQKLGLLYPAGSLSFEQIQDAVLNVARYDVFKLNEAMLAGDVGRLARMLDGL
RGEGEAAVLVLWAVVEEVRTLLRIKRGVTAGKPLAMLVRENRVWGPRERLIGPALSRVTE
SALEKALALAARLDRQVKGLSGGTPGNHRNDPPPDPWDGLFELAMTVASPAKAAPVPPPR
PRPAAGAPVRRPG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgacttgacgcgctcgaagcgcatctcgccaagggactcgccggactgtac
gtcgtgtacggcgacgagcacctgctcgcgcaggaagccagcgaccgcattcgcgcgacg
gcgcgagcagccggttttaccgaccgctcggtgttcaccgtcgagcgcggcttcgactgg
agctcgctgcttggcgcgagccagtcgatgtcgctgttcggcgaccgtcaactggtcgag
ttgcgcattccgtcgggcaagccgggcaaggaaggcgcggatgcgctgaaggcgctcgcc
gccgccgtgaatgacgacgtgctcacgatgatcacgctgccgcggctcgatgcggccacg
cagaagtcggcatggttcaccgcgctgtccgatgcgggtgtcgcgttgaaaatcgatccc
gttgagcgcgcgcagttgccgaattgggtgggtcaacggctcgcggctcagggccagcgg
gtcgttgccggtgaggaagggcggcgcgcgctggcgttcattgccgagcgcgtagaaggt
aatttgcttgccgcgcatcaggaaatccagaagctcgggctgctgtatccggctggttcg
ttgagcttcgagcagattcaggacgctgtgctgaacgtcgcccgttatgacgttttcaag
ctgaacgaggcaatgctggcgggcgatgtcggccgcctcgcgcgcatgctcgacggcctg
cgcggcgaaggcgaggcggccgtgctggtgctgtgggcagtggtcgaagaagtgcggacg
ctgctgcgtatcaagcgcggcgtcacggccggcaagccgctcgcgatgctggtacgcgag
aaccgcgtatgggggccgcgcgagcggctgattggaccggcgttgtcgcgcgtcaccgag
agtgcgcttgaaaaggcacttgctctggcggcgcggctggatcggcaggtgaagggattg
tcgggcggtacgccgggcaatcatcgcaatgatcctccgccggatccgtgggatggcttg
ttcgaactggccatgacggtggcgtcgccggcaaaagcggcgcctgtaccgccgccacga
cctcgccctgcagcaggtgcgccggttcgaaggccaggctga
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