Paraburkholderia caffeinilytica: DSC91_004871
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Entry
DSC91_004871 CDS
T06448
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcaf02044
]
DSC91_004871
02035 Bacterial motility proteins [BR:
pcaf02035
]
DSC91_004871
Secretion system [BR:
pcaf02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DSC91_004871
Bacterial motility proteins [BR:
pcaf02035
]
Pilus system
Pilus assembly proteins
DSC91_004871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_30
AAA_11
AAA_16
AAA_22
nSTAND3
AAA_19
AAA_23
DEAD
Mg_chelatase
DUF5073
PhoH
ResIII
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AXL52005
LinkDB
All DBs
Position
2:1622845..1624152
Genome browser
AA seq
435 aa
AA seq
DB search
MQDSFQRAASLRPIAVDSESAAKSRHNAFAADASASANLNSSLTDSDNAPAVRLLTDTLQ
EATRRNASDLHVEPAEHGWRMRLRIDGVLHEIPQPPAHLRDAFITRVKVLARMDIAERRV
PQDGRLRIATSPGRVEDYRVNSLPTLFGEKLVLRRLDALPTDLSLDSLGLDPQQREAVDA
AIRAPHGLVLVTGPTGSGKTLSLYCFLHMLNDEARNLCSVEDPAEIQLAGINQVSVREKA
GLTFAVALRAFLRQDPDVIMVGEIRDDETADVAVKAAQTGHLVLSTLHTNDAPAAVARLI
DIGVEPYNLAAALRMVTAQRLVRRLCPACRAPAPQSAAALRAAGFADEQLDGWLPFGATG
CAACHGIGYRGRVGIHQVMPVSDAMRELIVARAGTHELAGLAQSEQVVTLRIAALARVRD
GTTSLAEALAATEVA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattcttttcaacgcgcggcgtcgctgcggcccatcgccgtcgacagcgaaagc
gcagccaaatccaggcacaacgcctttgcggccgacgccagtgccagcgccaacctcaac
tcgagcctcaccgattccgacaacgcgccggccgtacgcctcctgactgacacgttgcag
gaggcaacccgccgcaatgcatcggacctgcacgtcgaaccggccgagcatggttggcgc
atgcgtttgcgcatcgacggcgtactgcatgaaatccctcagccccccgcgcatctgcgc
gacgcgttcatcacacgtgtgaaagtgctggcgcgcatggatatcgccgagcggcgcgtg
ccgcaagatggccggctgcgtatcgccacgtcgcccggccgcgtcgaagactatcgcgtc
aactcgctgcctacgctgttcggcgaaaagctggtgttgcgcaggctcgacgcgttgccc
accgatctttcgctcgactcgctcggcctcgacccacaacaacgtgaagcagtcgatgcc
gcaatccgcgcgccgcacggcctcgtgctggtcaccgggcccaccggtagcggcaagacg
ctgtcgctgtactgtttcctgcacatgctcaacgacgaggcgcgcaatctgtgctcggtg
gaggatccggcggaaattcagttggcgggtatcaatcaggtcagcgtgcgcgaaaaggct
ggcctgacattcgcggtggcgctgcgtgcatttctccgtcaggaccccgatgtgatcatg
gtcggcgagatccgcgacgacgaaaccgccgacgtcgccgtgaaggcagcgcaaaccggc
cacctcgtgctgtccaccttgcatacgaacgacgcgcccgctgccgtcgcgcgcctgatc
gacatcggcgtcgaaccgtacaacctggccgccgcactaaggatggtgaccgcgcaacgg
ctggtgcggcggctctgcccggcgtgccgcgcccccgcgccgcaatcggcggccgcgttg
cgagcagcgggtttcgccgatgagcagctcgacggctggctgccattcggcgccacggga
tgcgcagcgtgccatggcatcggctaccggggccgcgtcgggattcatcaggtgatgcct
gtctcagacgcgatgcgtgagcttatcgtggcacgcgcaggcactcatgagctggctggg
ctcgcgcaatctgaacaggttgtcaccttgcgcatcgcagccttggcgcgtgtgcgcgac
ggcacgacgagccttgctgaagcgctggccgccaccgaggtcgcatga
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