Paraburkholderia caffeinilytica: DSC91_005017
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Entry
DSC91_005017 CDS
T06448
Name
(GenBank) secretin
KO
K02666
type IV pilus assembly protein PilQ
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcaf02044
]
DSC91_005017
02035 Bacterial motility proteins [BR:
pcaf02035
]
DSC91_005017
Secretion system [BR:
pcaf02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DSC91_005017
Bacterial motility proteins [BR:
pcaf02035
]
Pilus system
Pilus assembly proteins
DSC91_005017
SSDB
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GFIT
Motif
Pfam:
Secretin
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
AXL52123
LinkDB
All DBs
Position
2:complement(1780044..1781597)
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AA seq
517 aa
AA seq
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MPIDDATAPPDARYDVPPLPRGIAAEVPNPFHDNSLDDSAADTGVSRRAATAGIGSTDDP
AGDTDGSVPLRRQSAASARDDPTGTSALEGPPVPLPPLARLSGAPKTPADAKLAADDKPI
SLNFQRAELGAVLGAFAQFTGLNIVASERVRGAVSLRLDKVPWRTAFDTLLDVNGLAMER
HGNVIWVAPITDLAARERQRFEAHARAADLEPLASRTFELHYARAEDVRRLLTGAGNQRV
LSKRGAATADPRTNLLFVTDLEGRLAQITTLLASIDRPTRQVLIEARIVEGEHGFSRNLG
VRLSMAAVNADGTARGLTGGKDGAVYDLSARPISGFDAATAGLTLFAAGATRLLNIELSA
LEAEGRGEIVSSPRVVTADRMKAVVEQGTELPYQAKVGQGVSGVQFRRATLKLEVEPQIM
PDGRVVLDLDVAKDSVGEQTDAGPAINTKHVQTRVEVEDGGTVSIGGIYATDNRDDVTRV
PVLGKIPVLGALFRHRAHRDQRSELAVFITPRVVQTN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgacgatgccactgcgccgcccgatgctcgatacgacgtgccgccgctacca
cgcggcatcgctgccgaagtgccgaatccgttccacgacaattccttggatgactccgcc
gctgacactggcgtgtcgcgaagggcagcaaccgccggcatcggaagcaccgacgacccg
gccggcgacaccgacggctcagtgccgctacggaggcaatccgcagcctcggcgcgcgac
gaccccaccggaacctcggcgctcgaaggccctccggtcccgctgccaccgcttgcgaga
ctgagcggcgccccgaaaacacccgccgacgccaaactcgccgccgacgacaagccgatc
tcgcttaacttccagcgcgcggaactcggtgcggtgcttggcgcgttcgcccagttcacc
ggcctgaacatcgtcgcgagcgagagggtgcgcggcgctgtctcactccggctcgacaag
gtgccgtggcgtaccgcgttcgataccttgctcgacgtcaacggactcgcgatggaacgc
cacggcaacgtgatctgggtcgcgccgatcacggatctggccgcgcgtgaacggcagcgt
ttcgaagcgcacgcccgtgccgccgatctcgagccgctcgcaagccgcacattcgagctg
cactacgcgcgcgccgaagacgtgcggcgtctgctgaccggcgccggaaaccagcgcgtg
ctgtccaaacgcggtgccgcgactgccgatccgcgcaccaatctgctgttcgtcaccgat
ctcgaaggacgactcgcgcagatcacgacattgcttgcttccatcgaccggccgacccgc
caggtattgatcgaggcgcgtatcgtcgagggtgagcatgggttttcgcgcaatctcggt
gtgcggctttccatggcggctgtcaacgccgacggcactgcgcgaggcttgaccggaggc
aaggacggtgccgtgtacgatctgtcggcgcggccgatttccggtttcgacgccgccacg
gccgggctgaccttgttcgccgccggcgcgacgcggctcctgaacatcgagctgagcgcg
ctggaggccgaagggcgcggtgaaatcgtctcgagccctcgggtcgtgacggcggatcgg
atgaaagcggttgtcgagcagggcaccgagctgccctatcaggcgaaagtgggacagggc
gtgtcgggcgtgcagtttcgccgcgccacgctcaaactggaggtcgagccgcaaatcatg
ccggacggcagagtggtgctggacctcgacgtcgccaaggacagcgtcggcgagcagacc
gacgccgggcccgcgatcaacaccaagcacgtgcaaacgcgcgtcgaagtcgaggatggt
ggtacggtgtcgatcggcggaatttacgcaactgacaaccgggacgatgtgacgcgagtg
cctgtcctgggcaaaataccggttttgggtgcgcttttccgccatcgggcccatcgggac
cagcgcagtgaactggctgttttcatcacgccgcgcgtcgttcagacaaattag
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