Paraburkholderia caffeinilytica: DSC91_005024
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Entry
DSC91_005024 CDS
T06448
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00300
Lysine biosynthesis
pcaf00470
D-Amino acid metabolism
pcaf01100
Metabolic pathways
pcaf01110
Biosynthesis of secondary metabolites
pcaf01120
Microbial metabolism in diverse environments
pcaf01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSC91_005024
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSC91_005024
Enzymes [BR:
pcaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DSC91_005024
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
SH3BP5
DUF2644
Motif
Other DBs
NCBI-ProteinID:
AXL52130
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All DBs
Position
2:1788086..1789348
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AA seq
420 aa
AA seq
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MTRSAFDYVDGVFHAEGVSAVSLAEQFGTPLYVYSRAALTEAWNAYAGACAGRRATVHVA
VKANSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHADEMRQALAAG
VKCFNVESIPELDRLNAVAAEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDA
RATYRAAAAMTHLDVVGIDCHIGSQITEVAPYLDAVDKVLELVEQIEQDGVKIRHIDVGG
GLGITYDDETPPEIGDFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPG
AEKNFAIVDAAMTDLARPAMYEAYHAIEAVVKHNVPAHVYDVVGPVCESGDWLGRERLLA
VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQVHVVRAREEVKQLFAGETILPA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatccgcatttgactacgtcgacggcgtgttccacgccgagggcgtgtccgcc
gtctcactcgccgaacagttcggcacgccgctgtatgtctattcgcgcgccgcgctcacc
gaagcgtggaacgcctacgcaggcgcttgcgccggccgccgcgcaaccgtgcacgtcgcc
gtcaaggccaatagcaatctcgcggtgctgaacgtattcgctcgcctcggcgcgggcttc
gacatcgtgtcgggcggcgaactggcgcgcgtgctggccgccggcggtaaagcggagaac
accgtgttttccggcgtcggcaagcatgcggacgagatgcgtcaggcgctcgcggccggc
gtcaaatgcttcaacgtcgaatcgattcccgagctcgaccgcctgaatgcggtggcggcg
gaaatgggcaaaaaggcacccgtctcgctgcgcgtgaatccggacgtcgatgcgaaaacg
catccgtatatttccaccggactgaagtcgaacaaattcggcgtcgcgttcgaagatgca
cgcgcgacgtatcgggccgccgcggcaatgacacatctcgacgtggtcggcatcgactgc
catatcggttcgcagatcactgaagtcgcgccgtatctggacgcggtcgacaaggttctc
gaactggtcgagcagatcgaacaggacggcgtgaagattcgccacatcgacgtaggtggc
ggcctcggcatcacgtacgacgacgaaacgccgccggaaatcggcgacttcgtgcgcacc
gtgctggatcgcatcgaagcgcgcggtcatgggcatcgtgaagtgtatttcgagccgggc
cgttcgctggtcggcaacgcaggtgtgctattgacgcgcgttgagtttctgaagcccggt
gcggaaaagaacttcgccatcgtcgatgcggcgatgaccgatctcgcgcgccccgcgatg
tacgaggcgtatcacgcgatcgaagctgtcgttaagcacaacgtgcccgctcatgtgtac
gacgtggtcggcccggtttgcgaaagcggcgactggctgggtcgtgagcgtctgctggcg
gtcgaaccgggcgatctgctcgcgattcgctcggctggcgcgtatggctttgtgatgagc
tcgaactacaacacccgtccgcgtgcagccgaggtgatggttgatggtacacaggtgcac
gtggtccgtgcacgcgaagaggtgaagcagctgtttgcgggcgaaacgatcttgccggcg
taa
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