KEGG   Paraburkholderia caffeinilytica: DSC91_005333
Entry
DSC91_005333      CDS       T06448                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pcaf  Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:pcaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcaf03032]
    DSC91_005333
   03036 Chromosome and associated proteins [BR:pcaf03036]
    DSC91_005333
   03400 DNA repair and recombination proteins [BR:pcaf03400]
    DSC91_005333
DNA replication proteins [BR:pcaf03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DSC91_005333
Chromosome and associated proteins [BR:pcaf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DSC91_005333
DNA repair and recombination proteins [BR:pcaf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DSC91_005333
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: AXL52359
LinkDB
Position
2:2111444..2111722
AA seq 92 aa
MNKQELIDAVAGQTGASKAQTGETLDTLLEVIKKSVSKGDAVQLIGFGSFGSGKRAARTG
RNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgcaggacaaaccggcgccagcaaggctcaa
accggtgagacgctggacacgttgctcgaagtgatcaagaagtctgtgtcgaagggtgac
gcggtccagctgatcggcttcggcagcttcggttcgggcaagcgcgcagcacgtacgggt
cgtaaccccaagaccggcgaaactatcaagatcccggccgccaagaccgtcaagttcacg
gctggtaaggcgttcaaggacgcggtcaacaagcgctaa

DBGET integrated database retrieval system