Paraburkholderia caffeinilytica: DSC91_005386
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Entry
DSC91_005386 CDS
T06448
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcaf03016
]
DSC91_005386
Transfer RNA biogenesis [BR:
pcaf03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DSC91_005386
Prokaryotic type
Methyltransferases
DSC91_005386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Ras
AAA_16
Roc
ABC_tran
Arf
AlphaC_N2
Motif
Other DBs
NCBI-ProteinID:
AXL52399
LinkDB
All DBs
Position
2:complement(2168061..2169455)
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AA seq
464 aa
AA seq
DB search
MLTTDSDPIVAIATAPGRGGIGVVRISFGRAGEAAAQPLMQALTGSALAPRHASYVPFLD
DAGNALDRGIALYFPAPHSYTGEHVLELQGHGGPVVLQLVLQRCIDAGRAFGLRLAEPGE
FTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVEEVITLRMLV
EATLDFPEEEIDFLEAADARGKLARIRERLADVLSEARQGALLREGLSVVLAGQPNVGKS
SLLNALAGAELAIVTPIAGTTRDKVAQTIQIEGIPLHVIDTAGLRDTEDEVEKIGIARTW
SEIERADVVLHLLDARTDMTAEDETIAARFPGGVPVVRVLNKTDLTGLAPSVTPLDADLE
LSEVRLSAKQGDGVALLREELLRIAGWQAGAESVYLARERHLIALRAAQEHLETAAAHAD
QNAQALDLFAEELRLAQDQLNSITGEFSSDDLLGVIFSRFCIGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaccgactccgatcctatcgtcgcgattgccaccgcacccggccgaggcgga
atcggggtcgtgcggatttcgtttggccgtgccggggaagccgccgcgcagccgttgatg
caagcgctcaccggctcggcactcgcgccgcgtcacgcgagctacgtgccgttcctcgac
gacgccggcaacgcgctcgaccgcggcatcgcactttactttcccgcgccgcactcctac
accggcgaacacgtgctcgagttgcaaggccacggcggtccagtcgtgctgcaactggtg
ctgcagcgttgcatcgacgccggccgcgcgtttggtctgcgtctggccgagccgggcgaa
ttcacgcgacgcgcatttctcaacgacaagctggatctggcgcaagccgaagccgtcgcc
gatctgatcgaggccagcacggaggccgccgcacgctcggcgggccgctcgctcgacggt
gcgttttcgcgcgacatccatgcgttggtcgaagaagtcattacgctgcggatgctggtc
gaagcgacgctcgatttcccggaagaagaaatcgactttctggaagccgccgacgcccgc
ggcaagctcgcgcgaatccgcgagcgccttgcggacgtgctgagcgaagcgcgccagggc
gcgttgctgcgcgagggtttgtcggtggtgctggcgggacagccgaacgtcggcaagtcg
tcgctgttgaacgccctcgccggcgccgagttggctatcgtcacaccgatcgccggcacg
acgcgcgacaaggtcgcgcaaaccatccagatcgaaggcattccgctgcacgtgatcgat
acggccggcctgcgcgataccgaagacgaagtggaaaagatcggcattgcgcgcacatgg
agcgagatcgagcgcgccgacgtcgtgttgcatctgctcgatgcgcgcaccgacatgacc
gccgaagacgaaacgatcgctgcacgtttcccaggcggcgtgccggtggtgcgcgtgctg
aacaaaacggatctgaccgggctcgcgccgtccgtgacgccgctcgacgcggatctcgaa
ctcagcgaagtgcggctgtcggccaaacagggcgatggggtcgcgttgctgcgcgaggaa
ttgctgcggatcgccggctggcaggccggcgcggaaagcgtctacctcgcgcgtgagcgg
catctgattgcgctgcgcgcggcccaggagcatctggagacggccgcggcgcacgccgat
cagaatgctcaggcactcgatctgttcgccgaagaactgcgtctcgcgcaggatcaactg
aactcgatcactggtgaattcagctcggacgacctgctcggggtgattttcagccggttt
tgcatcgggaaatag
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