Paraburkholderia caffeinilytica: DSC91_005760
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Entry
DSC91_005760 CDS
T06448
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSC91_005760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaf03400
]
DSC91_005760
Enzymes [BR:
pcaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
DSC91_005760
DNA repair and recombination proteins [BR:
pcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSC91_005760
Prokaryotic type
DSC91_005760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
HHH_5
DUF6083
HHH_3
HHH_8
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AXL52653
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All DBs
Position
2:2546789..2547850
Genome browser
AA seq
353 aa
AA seq
DB search
MSDFSRRLIAWQRQHGRHDLPWQNTRDPYRIWLSEIMLQQTQVSTVIPYYARFLARCPDV
ASLAAAPADDVMALWAGLGYYSRARNLHRCAQVVVEQHGGAFPASADELAELPGIGRSTA
AAIASFAFGARATILDGNVKRVLARIFGVEGFPGEKKVENAMWTLAESLLPSNASDDEVS
AYTQGLMDLGATLCVRGKPDCLRCPFAADCVANVSGRQRELPTARPKKAVPTRRTWMLVL
RDGNAVMLEKRPPSGIWGGLWSLPEAADEAALAERARAFGGDGAVSPLAPLTHVFTHFKL
DIEPRLAELDRGVGALAELGDADTAWVALSELDSFGVPAPVRKLLDSLHGSLL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttttccaggcggctgatcgcgtggcagcgccagcatggccgtcatgacctg
ccctggcagaacacgcgcgatccgtatcgcatctggctgtcggaaatcatgctgcagcag
actcaggtatcgacggtgattccgtactacgcaaggtttcttgctcggtgtccggatgtt
gcctcgctcgccgccgcgccggcagacgacgtgatggcgttgtgggccggcctcggctac
tactcgcgcgcgcgcaatctgcaccgctgcgcgcaggtggtcgtcgagcagcatgggggc
gcgtttccggcgtcggccgacgaacttgccgaactgccaggcatcggccgctcgacggca
gcggcgatcgcctctttcgcatttggcgcgcgggcgacgattctcgacggcaacgtgaag
cgcgtgttggcgcggatatttggcgtcgaaggttttccgggtgaaaagaaagtcgagaac
gcgatgtggacgctggcggaatcgctgctgccgtccaacgcatcggacgacgaggtcagt
gcgtacacccaaggcctgatggacctcggcgcgacgttgtgcgtgcgcggcaagccggac
tgcctgcgctgcccgttcgccgcggactgcgtggccaacgtgagcggacgtcagcgtgaa
ctgcccacggcacggccgaagaaagcggtgccgacgcgccgcacgtggatgctggtgctg
cgcgacggcaacgccgtgatgctggaaaagcgtccgccttcggggatctggggcggcttg
tggagcctgcccgaagccgccgacgaagccgcgctcgccgagcgtgcgcgtgccttcggt
ggcgacggcgcggtttcgccgctcgcgccgcttacgcacgtcttcacgcatttcaagctg
gatatcgagccgcggctcgctgaactggatcgcggtgtgggcgcattggcagagttgggc
gacgccgataccgcatgggtcgcgttaagcgagctcgattcgtttggcgtgcccgcaccc
gtgcgcaaactcctggacagtctgcacggctcgctgctttag
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