Paraburkholderia caffeinilytica: DSC91_005766 Help Entry DSC91_005766      CDS       T06448                                  Name (GenBank) RNA polymerase subunit sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism pcaf  Paraburkholderia caffeinilytica Pathway pcaf02020   Two-component system pcaf02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:pcaf00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     DSC91_005766  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     DSC91_005766  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pcaf03021]     DSC91_005766 Transcription machinery [BR:pcaf03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      DSC91_005766 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_23 Motif Other DBs NCBI-ProteinID:  AXL52659 UniProt:  A0ABQ1M4E1 LinkDB All DBs Position 2:complement(2552028..2553545) Genome browser AA seq 505 aa AA seqDB search MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAISQNPLLENEDDWIASPLRV AADGSLITQAPNSSAPPDQMGGNTSSSSTSSSERADNGEPQGVDEYNGLAGDSNGEASQW DLGDYGRSGNASDDDDLPPLQIHESSTSLRDHLMAQLRVTQASQRDRALITFLIESLDDD GYLAATLEEVLTDLPEELEVDLDEMNAALALLHSFDPAGVGARSASECLKLQLLRLEQSP TRTLALDIVAHHLELLAARDFTRLRKHLKANDDDLRDAHVLIRSLEPFPGAAYGKAEADY VVPDIMVRKTAQGWQAELNPEVVPKLRINHLYANILRNNRGDPGSGSLRQQLQEARWLIK NIQQRFETILRVAQAIVERQKSFFVHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYML TPFGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAENPKSPLSDSRIAELLAEQGF VVARRTVAKYREALKIPAVNLRKSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgaaagccagcctccaactccgcctatcgcagcatcttgcgctgaccccgcaactgcag cagtccatccggctgcttcagctgtccacgctcgaactgcagcaggaagtcgcaatggcg atctcgcagaatccgctcctcgagaatgaggacgactggatcgcgagtcccctgcgcgtg gcggccgacggctcgctgattacccaggcgcccaattcctccgcgccgcccgaccagatg ggcggcaatacgtcgtcttcgtccaccagcagcagcgagcgcgccgacaacggcgagccg cagggtgtcgacgagtacaacggcctcgccggcgacagcaacggcgaagcgtcgcaatgg gatctgggcgactacggccgctccggcaacgcctcggacgacgacgatctgccaccgctg caaatccacgaatcgagcacgtcgctgcgcgatcacctgatggcgcaacttcgcgtcacc caggcgagccagcgcgaccgcgcgctaatcacgtttctgatcgaatcgctcgacgacgac ggctatcttgccgccacgctcgaggaagtgctgaccgacctgcctgaagagctcgaggtc gatctcgacgaaatgaacgccgcgcttgcgctgctgcacagcttcgacccggcaggggtc ggcgcacgctcggcatcggaatgtctgaagctgcaattgctgcggctcgaacagtcgcct acgcgcacgcttgcgctcgacatcgtcgcccaccacctggaactgcttgcggcacgcgat ttcacgcgcctgcgcaagcacctgaaggcgaacgacgacgatctgcgcgacgcgcatgtg ctgatccgctcgcttgagccgtttcccggcgcggcctacggcaaggccgaagcagactac gtcgtgccggacatcatggtgcgcaaaacggcacagggctggcaggcggaactcaatccg gaagtggtgccgaagctgcgcatcaaccatctgtacgcgaatattctgcgcaataaccgg ggcgatcctgggagcggatcgttgcgccagcaactgcaggaagctcgctggctgatcaaa aatatccagcagcgtttcgagactatcctccgggtcgcgcaagccattgtcgagcgtcaa aagagcttttttgtgcacggcgaaattgccatgcgccccttggttttgcgagaaattgct gatacgctgggcctacacgaatcaactgtctcccgtgtgacaaccggtaaatacatgctg accccattcgggacgcttgaatttaagtacttcttcggatcacacgtttcgactgacacg ggcggcgcggcctcttccacggccattcgcgcgctcatcaagcaactgataggagcggaa aacccgaaatctcctctttcagacagccgcatagccgaactgctggcggaacagggcttc gtggtcgcacggcgtaccgttgcgaagtatcgcgaagcgctcaagattccggcagtcaac ctgcgcaagtctctgtag

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