Paraburkholderia caffeinilytica: DSC91_006002
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Entry
DSC91_006002 CDS
T06448
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00051
Fructose and mannose metabolism
pcaf00541
Biosynthesis of various nucleotide sugars
pcaf01100
Metabolic pathways
pcaf01250
Biosynthesis of nucleotide sugars
Module
pcaf_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
pcaf_M01019
GDP-6-deoxy-Tal biosynthesis, GDP-Man => GDP-6-deoxy-Tal
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
DSC91_006002
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSC91_006002
Enzymes [BR:
pcaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
DSC91_006002
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
AXL52830
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Position
2:2818102..2819220
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AA seq
372 aa
AA seq
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MKRKVALITGITGQDGSYLAELLLAKDYDVHGIKRRSSLFNTDRIDHLYRDPHDPDQRLF
LHHADLTDSTSILRVIQRVEPDEIYNLAAQSHVAVSFEEPEYTANADGLGALRILEAVRI
LGLQHETRFYQASTSELYGLVQQVPQSEATPFYPRSPYAVAKLFAYWTTVNYREAYGLYA
CNGILFNHESPVRGETFVTRKITRAIARIAVGMQKTLYLGNLSALRDWGHARDYVEMQWR
MLQQERPEDYVIATGVQYSVREFVQHAAAELGVTVRFEGTGVEEVGIVEKVEGREIKMSP
GDVIVRVDPRYFRPAEVETLLGDPSKAHAQLGWKPTTSFSALVKEMVRADYQIARRDALV
TLAGFTALEHHE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaggtcgcgctgattaccggcatcactggacaggacgggtcgtatctcgcc
gagctgctgctcgccaaggattacgacgtacacggcatcaaacgcaggtcatcgctgttc
aatacggaccggatcgatcatctctatcgcgacccgcacgacccggaccagcggctcttc
ctgcatcacgcggacctgaccgactcgaccagcatcctgcgcgtgatccagcgtgtcgag
cccgacgagatctacaacctcgcggcgcagagccacgtggcggtttcgttcgaggaaccg
gaatataccgctaacgcggacggcctcggcgcgttgcggattctcgaagcggtccgcatt
ctgggccttcaacacgagacgcgcttctatcaggcttcgacctcggagctgtacggtctc
gtgcaacaggtgccgcagtccgaggccacgccgttctatccgcgcagcccgtatgcggtc
gccaagctgttcgcgtactggaccacggtcaattaccgcgaggcatacggactctatgcc
tgcaacgggattctgttcaatcacgaatcgccggtgcgcggcgagaccttcgtgacgcgc
aagatcacgcgcgccatcgcgcgcattgcggtgggcatgcagaagaccttgtatctgggc
aatctgtcggcgttgcgcgactggggtcatgcgcgcgactacgtggagatgcaatggcgc
atgctgcaacaggagcggccggaggattacgtcatcgccaccggcgtgcagtacagcgtg
cgtgagttcgttcagcatgccgccgccgagctgggcgtcacggtgcgtttcgaaggcacc
ggtgtggaagaagtcggcatcgtcgaaaaggtggaggggcgcgaaatcaagatgtcgccc
ggcgatgtgatcgtgcgcgtcgatccgcgctacttccggccggccgaagtcgagacgttg
ctgggcgatccgtcgaaagcccatgcgcagctcggctggaagccgaccacgtcgttcagc
gcgctcgtcaaggaaatggtgcgggcggactatcagattgcgagacgtgacgcgcttgtc
acgctggccggtttcacggcgctggaacatcacgagtaa
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