Paraburkholderia caffeinilytica: DSC91_006160
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Entry
DSC91_006160 CDS
T06448
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00450
Selenocompound metabolism
pcaf00970
Aminoacyl-tRNA biosynthesis
pcaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DSC91_006160
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSC91_006160
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcaf01007
]
DSC91_006160
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcaf03016
]
DSC91_006160
Enzymes [BR:
pcaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
DSC91_006160
Amino acid related enzymes [BR:
pcaf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
DSC91_006160
Transfer RNA biogenesis [BR:
pcaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DSC91_006160
Prokaryotic type
Other AARSs
DSC91_006160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
tRNA-synt_1f
Anticodon_1
Anticodon_3
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
AXL52947
LinkDB
All DBs
Position
2:complement(2986808..2988952)
Genome browser
AA seq
714 aa
AA seq
DB search
MSAPATDLSAGAPSGRRQVLVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYV
GADDTHGTPVMLRAEKEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSES
VYLALKDAGLIEARDIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPT
ELVNPYSVVSGATPIRKTSTHYFFRLSDPRCENFLREWVSGLAQPEATNKMREWLGEAGE
AKLADWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWIRKGS
TAEQYHFIGKDILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQS
VIDTGLNPEWLRYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRF
DGLVQDSAMQHPLLATLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQA
KDPANAAALHETCSVSIEAFRLLSLALKPVLPKLAEAVEAFLGIEPLVWADANVPLSSTR
PINAYKHLMTRVDPKQIEALIAANRDSLQTTPEAAAPADAKAKSKAAKAAKAAAANNDET
PGIISIDDFARIDLRVAKIVDCKAVDGSDKLLQLTLDIGEEKTRNVFSGIKSAYQPEQLI
GKLTVMVANLAPRKMKFGLSEGMVLAASATDEKAEPGLYVLEPDSGAKPGMRVK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacccgcaaccgatctctccgcaggcgcgccgtcaggccgtcgccaggttctc
gtcacgtcggcccttccgtatgcgaatgggcaaatccatatcggccatctggttgaatat
atccagacggacatctgggtccggacgttgcgaatgcacgggcacgaggtctactacgtg
ggcgccgacgacacgcacggcacgcccgtcatgctgcgcgcggagaaggaaggtctgacg
ccgaagcagttgatcgaccgcgtctggcaggagcacaagcgcgatttcgacagcttcggg
atttcgttcgacaattactactcgaccgattccgaagagaaccgcgtgctgagcgaatcg
gtctacctggcgctcaaggacgccggcctgatcgaagcgcgcgacatcgagcaggcatac
gatcccgtcaaggaaatgttcctgccggaccgcttcatcaagggcgaatgcccgaagtgc
ggcgcgaaggatcaatacggcgacagttgcgaagtatgcggttcgacttatctgccgacc
gaactggtcaatccgtattcggtcgtctcgggcgccacgccgattcgcaagacctcgacg
cactacttcttccggctgtccgatccgcgttgcgaaaatttcctgcgcgaatgggtcagc
ggcctcgcgcaaccggaggccaccaacaagatgcgcgaatggctcggcgaggccggcgaa
gccaagctcgccgactgggatatttcgcgcgacgcgccgtatttcggcttcgaaattccg
ggcgcgccgggcaagtatttctacgtgtggctggatgcaccggtcggctattacgcaagc
ttcaagaacctggccgaaaaacgcggcctcgacttcgacgcgtggattcgcaagggctcg
accgccgagcagtaccacttcatcgggaaggacattctgtatttccacacgctgttctgg
ccggccatgctcgaattttcgggccaccgcacgccgaccaacgtgttcgcgcacggcttc
ctgacggtggacggcgcgaagatgtcgaagtcgcgcggcacgttcatcaccgcgcaaagc
gtgatcgacacgggcctcaatccggagtggctgcgctactacttcgccgccaagctaaac
agcacgatggaagacctcgacctgaacctcgacgacttccaggcgcgcgtgaacagcgac
ctggtcggcaaatacgtgaacatcgcgagccgcgccgccggtttcctgatcaagcgtttc
gacggcctcgtgcaggacagcgcgatgcagcacccgctgctcgccacactgcgcgccgcc
gtgccgcaaatcgccgcgaactacgaagcacgcgagtacaaccgcgcgctgcgtcagacc
atggaactggccgacgcggtcaacgcctacgtcgacaccgccaagccgtgggatcaggcg
aaagacccggcgaacgcggccgcgctgcacgaaacctgcagcgtcagcatcgaggcgttc
cgtctgctctcgctggcgctcaagccggtgttgccgaagctggcggaagcggtggaggcc
ttcctcggcatcgaaccgctggtgtgggccgacgcaaacgtgccgctctcctccacgcgc
ccgatcaacgcgtacaagcatctgatgacgcgcgtcgatccgaagcagatcgaggcgctg
atcgcagcgaatcgcgattcgcttcaaaccacgccggaagccgcggcgccggcggatgcc
aaggccaagtcgaaggccgcgaaagcagcgaaagcagccgccgccaacaacgacgaaacg
cccggcatcatctcaatcgacgatttcgccaggatcgatctgcgcgtcgcgaagatcgtc
gactgcaaggcggttgacggctcggacaagctgctgcaactcacgctcgacatcggtgaa
gagaagacgcgcaacgtgttctcgggtatcaagtcggcctatcagccggagcaactgatc
ggcaagctgacggtgatggtcgcaaacctcgcgccgcgcaagatgaagttcggcctgtcc
gaagggatggtgctggcagcctcggcgaccgacgagaaagccgagccgggcctttacgtc
ctcgaaccggatagcggcgcgaagccgggcatgcgcgtgaaataa
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