Paraburkholderia caffeinilytica: DSC91_006166
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Entry
DSC91_006166 CDS
T06448
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00330
Arginine and proline metabolism
pcaf01100
Metabolic pathways
pcaf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DSC91_006166
Enzymes [BR:
pcaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
DSC91_006166
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
SP2_C
SPACA9
Motif
Other DBs
NCBI-ProteinID:
AXL52952
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All DBs
Position
2:2993083..2995368
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AA seq
761 aa
AA seq
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MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGAEVLGLTSYGDLTSFAQQSSRASCF
ILSIDDDELLPYVDNVVVEGETPELAAAIIALRAFVTEVRRRNADIPIFLYGETRTSRHL
PNDILRELHGFIHMFEDTPEFVARHIIRETKVYLDSLAPPFFKELVQYADEGSYSWHCPG
HSGGVAFLKSPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSAD
HVFFVTNGTSTSNKIVWHGTVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNNFGI
IGPIPRSEFEPENIRKKILANPFAREALARNPDLKPRILTITQSTYDGVIYNVEMIKEML
GDWLDTLHFDEAWLPHAEFHEFYQDMHAIGAGRPRIGALVFATHSTHKLLAGISQASQIV
VQDSKNSRFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEAPGGTALVEESIAEALDF
RRAMSKVDAEYGDDWFFKVWGPDQFAEEGIGSREDWMLRPNDAWHGFGPLADGFNMLDPI
KATIVTPGLDMDGGFGESGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSM
VTELQQFKDDYDNNQPLWRVLPEFVSHHPMYERVGLRDLCQQIHSVYRANDIARLTTEMY
LSSMEPAMKPSDAFAKLAHREIDRVPIDELEGRVTSILLTPYPPGIPLLIPGERFNKTIV
NYLRFAREFNERFPGFHTDIHGLVGETINGRIEYFVDCVRA
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgttttcccgtcgtcatcatcgacgaagattttcgctccgagaatatctcg
ggttccggcatccgggctttggccgaagctatcgagaaagaaggcgcggaagtgctcggg
ttgacgagctacggcgatctgacctcgttcgcgcagcagtcgagccgcgcatcgtgcttc
atcctgtcgatcgacgacgacgagctgctgccgtacgtcgataacgtcgtggtggaaggc
gagacgccggagctggcggccgcgatcatcgcgctgcgcgcgttcgtgaccgaagtgcgc
cgccgcaacgccgatattccgatcttcctgtacggcgaaacgcgcacctcgcgccacctg
ccaaacgacatcctgcgtgaactgcacggcttcatccacatgttcgaggacacgccggag
ttcgtcgcgcgtcacatcattcgcgagaccaaggtgtacctggattcgctcgcgccgccg
ttcttcaaggaactggtgcagtacgcggacgagggctcgtattcatggcattgcccgggc
cactcgggcggcgtcgcgtttctgaagagcccgcttggccagatgttccaccagttcttc
ggcgagaacatgctgcgcgccgacgtgtgcaatgcggtcgacgaactcggccagctgctc
gaccacacgggtccggttgccgcctccgagcgcaacgccgcgcgcattttcagcgccgac
cacgtgttcttcgtgaccaatggcacgtcgacctcgaacaagatcgtctggcacggcacg
gttgcaccgggcgacatcgtgctggtggaccgcaactgccacaagtcgatcctgcacgcg
atcaccatgaccggcgcgattccggtgttcctcacgccgacgcgcaacaacttcggcatc
atcggcccgattccgcgcagcgaattcgagccggaaaacattcgcaagaaaatcctggcg
aatccgttcgcccgcgaagcgctggccaggaatccggatctgaagccgcgcattctgacc
atcacgcagagcacctacgacggcgtgatctacaacgtcgagatgatcaaggaaatgctc
ggcgactggctcgatacgctgcacttcgacgaagcgtggctgccgcatgccgaattccac
gagttctatcaggacatgcatgcgatcggcgcgggccgtccgcgcatcggcgcgctggtg
ttcgccacgcactccacgcacaagctgctggccggtatttcgcaggcttcgcagatcgtc
gtgcaggattcgaagaatagccgcttcgacaagcatcgcttcaatgaagcgtatttgatg
catacgtccaccagcccgcagtacgcgatcattgcttcgtgcgacgtggccgcggcaatg
atggaagcgccgggcggcacggcgctcgtcgaagagtcgatcgctgaagctttggatttc
cgccgcgcgatgagcaaggttgacgccgagtacggcgacgactggttcttcaaggtgtgg
ggcccggaccagtttgccgaagaaggcatcggctcgcgcgaagactggatgctgcgcccg
aacgacgcgtggcacggtttcggcccgctcgccgacggtttcaacatgctggacccgatc
aaggcgaccatcgtcacgccgggtctggatatggacggcggcttcggcgagtccggcatt
ccggctgcgatcgtcacgaagtacctggccgagcacggcatcattgtcgagaagaccggt
ctgtattcgtttttcatcatgttcacgatcggcatcaccaagggccgctggaactcgatg
gtgactgagttgcagcagttcaaggacgactacgacaacaaccagccgctgtggcgcgtg
ctgcccgagttcgtctcgcatcatccgatgtacgagcgcgtgggcttgcgcgatctgtgc
cagcagatccacagcgtgtaccgcgcgaacgacattgcgcgcctgacgaccgagatgtac
ctgtcgagcatggaaccggcgatgaagccgtcggatgcattcgccaagctcgcgcaccgc
gagatcgaccgggtaccgatcgacgaactcgaaggccgcgtcacgtcgattctgctgacg
ccgtatccgccgggcattccgctgctgattccgggcgagcgcttcaacaagaccatcgtc
aactatctgcgtttcgcgcgcgagttcaacgagcgcttcccgggtttccacacggatatc
cacggactggtcggcgaaaccatcaacgggcgcatcgaatacttcgtcgattgcgtgcgc
gcctga
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