Paraburkholderia caffeinilytica: DSC91_006257
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Entry
DSC91_006257 CDS
T06448
Name
(GenBank) DNA glycosylase
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaf03400
]
DSC91_006257
DNA repair and recombination proteins [BR:
pcaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
DSC91_006257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AXL53016
LinkDB
All DBs
Position
2:complement(3096226..3096672)
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AA seq
148 aa
AA seq
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MVDIVDSATRSRMMSGIRGRNTKPEILIRSLLHGRGFRFRLDARDLPGRPDIVLPRYRAV
VLVHGCFWHGHDCHLFKWPQTRPEFWRDKIGRNRSNDDKVRAALLASGWRVGVVWECALR
GANRDIEGVLQRLAEWLKSDAPSFEERG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatatcgtcgacagcgcaacgcgcagccggatgatgtccggtattcgcggccgc
aacacgaagccggaaatcctgatccgcagcctgctgcacggccggggctttcgcttccgt
ctggacgcgcgcgatctgccgggccggccggatatcgtgctgccgcgctatcgcgccgtc
gtgctggtgcacggctgtttctggcacggtcacgactgtcatctgttcaaatggccgcaa
acgcggcccgagttctggcgcgacaagatcggccgcaatcgcagcaacgacgacaaggtt
cgggcggcgctgctcgcgagcggctggcgcgtcggggtggtctgggaatgcgctttgcgc
ggtgcgaatcgcgatatcgaaggcgtgttgcaacggctcgccgagtggttgaagagcgac
gcgccgagcttcgaggaacgcggctga
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