Paraburkholderia caffeinilytica: DSC91_006770
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Entry
DSC91_006770 CDS
T06448
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcaf03021
]
DSC91_006770
03009 Ribosome biogenesis [BR:
pcaf03009
]
DSC91_006770
Transcription machinery [BR:
pcaf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
DSC91_006770
Ribosome biogenesis [BR:
pcaf03009
]
Prokaryotic type
rRNA transcription factors
DSC91_006770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
KH_NusA_C
Prot_ATP_ID_OB_C
KH_2
KH_1
Motif
Other DBs
NCBI-ProteinID:
AXL53381
LinkDB
All DBs
Position
2:3642541..3644016
Genome browser
AA seq
491 aa
AA seq
DB search
MSREVLMLVDALAREKNVDKDVVFAALEAALASASKKLFEEDADIRVQIDRESGEHETFR
RWKVVPDEAGLQEPDQEILLFEAREQKPEIQLDEYIEEPVPSIEFGRIGAQAAKQVILQK
VRDAEREQILNDFLERGEHIMTGSVKRLDKGNFIVETGRVEALLRRDQLIPKENLRVGDR
VRAYIAKVDRTARGPQIELSRTAPEFLMKLFEMEVPEIEQGLLEIKAAARDPGVRAKIGV
VAYDKRIDPIGTCVGIRGSRVQAVRNELGGENVDIVLWSEDPAQFVIGALAPAAVQSIVV
DEEKHSMDVVVDENELAVAIGRSGQNVRLASELTGWQINIMTPDESAQKQNQERGVLRDL
FMARLDVDEEVADILIDEGFTSLEEIAYVPLNEMLEIEAFDEDTVHELRNRSRDALLTLA
IANEEKVENVALDLKSLDGMDADLLAKLAEHQIQTRDELAELAVDELVEMTGMEEDAAKA
LIMKAREHWFQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgaagtgttgatgctggtggatgcgctggcacgcgagaagaacgtcgataaa
gacgtggtatttgccgcgctcgaggcggccctcgcttcggcctccaagaaactcttcgaa
gaagacgcggacatccgcgtccagatcgaccgtgaaagcggcgagcacgaaacgtttcgc
cgctggaaagtggtgccggacgaagccggcctgcaggagccggaccaggaaatcctgctg
ttcgaggcacgcgaacagaagccggagattcaactcgacgaatacatcgaagaaccggtg
ccgtcgatcgaattcggccgtatcggcgcgcaggctgccaagcaggtgatcctgcagaag
gtgcgcgacgcggaacgcgagcagatcctgaacgatttcctcgagcgcggcgagcacatc
atgaccggctcggtgaagcgcctggacaagggcaacttcatcgtcgaaaccggccgtgtc
gaggcgctgctgcgtcgcgaccagctgattccgaaggaaaacctgcgcgtgggtgaccgc
gtgcgcgcctatatcgccaaggtcgatcgcaccgctcgcggtccgcagatcgaactgtcg
cgtacggcgcccgaattcctgatgaagctgttcgaaatggaagtgccggaaatcgaacag
ggcctgctggaaatcaaggcggccgcccgcgacccgggcgtgcgcgccaagatcggcgtg
gtcgcttacgacaagcgcatcgacccgatcggcacctgcgtcgggatccgtggttcgcgg
gtacaggcagtgcgcaacgagctcggtggcgaaaacgtcgacatcgtgctatggtcggaa
gatcccgcacagtttgtgatcggcgcgctcgcgccggcagccgtccagtcgatcgtcgtc
gatgaagaaaagcattcgatggacgtcgtcgtagacgaaaacgaactggcggtcgcgatc
ggccgcagcggccagaacgtgcgtcttgccagcgaactcaccggctggcagatcaacatc
atgacgccggacgaatctgcgcaaaagcagaatcaggaacgcggtgtactgcgcgacctg
ttcatggcgcgtctcgatgtcgacgaggaagtggccgacatcctgatcgacgaaggcttt
acgagcctcgaagagattgcctatgtgccgctcaacgagatgctcgagatcgaagcattc
gacgaagacaccgttcacgaactgcgtaatcgctcgcgcgatgcgttgttgacgttggcg
atcgcgaatgaagaaaaggtcgagaatgttgccctcgacctgaagagcctggacggcatg
gatgccgacctgctcgccaagcttgccgaacatcagatccagacgcgcgacgaactcgcc
gagctggctgtggatgaactggtcgagatgaccggaatggaagaggatgccgctaaggcg
ttgatcatgaaagcacgtgaacactggttccagtga
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