Paraburkholderia caffeinilytica: DSC91_006815
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Entry
DSC91_006815 CDS
T06448
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00061
Fatty acid biosynthesis
pcaf00071
Fatty acid degradation
pcaf01100
Metabolic pathways
pcaf01212
Fatty acid metabolism
pcaf02024
Quorum sensing
pcaf04146
Peroxisome
Module
pcaf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DSC91_006815
00071 Fatty acid degradation
DSC91_006815
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DSC91_006815
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSC91_006815
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcaf01004
]
DSC91_006815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcaf04147
]
DSC91_006815
Enzymes [BR:
pcaf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DSC91_006815
Lipid biosynthesis proteins [BR:
pcaf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DSC91_006815
Exosome [BR:
pcaf04147
]
Exosomal proteins
Exosomal proteins of breast milk
DSC91_006815
Exosomal proteins of breast cancer cells
DSC91_006815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
TMEM117
Motif
Other DBs
NCBI-ProteinID:
AXL53414
LinkDB
All DBs
Position
2:complement(3692415..3694220)
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AA seq
601 aa
AA seq
DB search
MTQPTQVPLSPTAGATPLANAADPAPSQAANRAPNTDGIWYTSYPANVPHEIDVNQYESV
VQFFDECIAQFRERVAYVSVGANMTYGELGRKAAAFAAYLQSIGVKPGERVAIMLPNTFQ
YPVSLFGVLKAGGVVVNVNPLYTVRELAHQLKDSGAQTIIVFENFAKTVEDALPGTKIQN
VIVTGLGDLLADGLNLKGRLLNFMLRHVKKMVPAYNLPKAVPLLDALSTGYTRPLTPVRP
THNDIAFLQYTGGTTGVAKGAMLTHRNIIANLLQAKVWSEGQLSGDIETVLTPLPLYHIY
SLTVNALIFMGLGGRNILIANPRDMKRVMMIIRHEKFTGITAVNTLYNAFLDNEEFCKRD
FSNLKLAMAGGMATQKSVADRFKAVTGKPIIEGYGLTECSPIVSMNPVDLTNLRDFEGSI
GLPAPSTQVRFRKDDGSWANIGEAGELCVKGPQVMKGYWNRPEETAKVIDDDGWLATGDI
GVMDSRGFIRLIDRKKDMILVSGFNVYPNEVEDVIAALPDVREVAAIGVPDAAQGERVKV
FIVKRNPSLTAEQVIAHCRKNLTGYKVPKLVEFRDELPQTNVGKILRRALRDEELAKQKP
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacccacgcaagtcccgctctcgcccaccgccggagccacgccgctcgcgaac
gcggcggacccggcgcccagtcaggcggcgaatcgcgcgcccaacaccgacggcatctgg
tacacctcgtatcccgcgaacgtgccgcatgaaatcgacgtcaaccagtacgagtcggtc
gtgcagttcttcgacgaatgcatcgcgcagtttcgcgagcgcgtcgcgtatgtgagcgtc
ggcgcgaacatgacgtatggcgagcttggccgcaaggcggccgcgttcgccgcgtacctg
caaagcatcggtgtgaagcccggcgagcgtgtcgcgatcatgctgccgaatacgttccag
tatccggtgtcgctgttcggcgtgctcaaggcaggcggcgtggtagtcaacgtgaacccg
ctctacacggtgcgcgagctcgcgcaccagctgaaggacagcggcgcgcaaaccatcatc
gtgttcgagaacttcgcgaagaccgtcgaagacgcgctgcccggcaccaaaatacagaac
gtcatcgtgaccggtctcggcgatctgctcgccgacggcctgaatctgaagggccgtctg
ctgaacttcatgctgcgccatgtgaagaagatggtgccggcatacaacctgccgaaagcg
gtgccgctgctcgatgcgctctcgaccggttacacgcggccgctgacgcccgtgcgcccc
acgcacaacgacatcgccttcctgcaatataccggcggcaccacgggcgtggccaaaggc
gcgatgctcacgcacaggaacatcatcgccaacctgctgcaggcgaaggtctggtccgag
gggcagttgagcggcgacatcgaaacggtgctcacgccgttgccgctctatcacatctat
tcgctgacggtgaacgcgctgatcttcatgggcctcggcggacgcaacatcctgattgcc
aatccgcgcgacatgaagcgcgtgatgatgatcatccgtcacgagaaatttaccggtatc
acagcggtcaatacgctctacaacgcgttcctcgacaacgaggagttctgcaagcgcgat
ttctcgaacctgaaactcgcgatggccggtggcatggccacgcagaagtcggtcgccgat
cgcttcaaggcggtcaccggcaagccgatcatcgaaggctatgggctgaccgagtgctcg
ccgatcgtgtcgatgaatccggtggacctgaccaatctgcgcgacttcgaaggctcgatc
ggtttgcccgcgccgtccacgcaagtccgcttcaggaaagacgacggctcgtgggcaaac
atcggtgaagcgggcgagctgtgcgtgaagggtccgcaggtcatgaaaggctactggaat
cgcccggaagaaaccgccaaggtgatcgacgacgacggctggctcgccaccggcgacatc
ggcgtgatggattcgcgcggcttcatccgcctgatcgaccgcaagaaggacatgattctg
gtgtcgggcttcaacgtctatccaaacgaagtcgaagacgtgatcgcggcgcttccggac
gtgcgcgaagtcgccgcaatcggcgtgcccgacgcggcgcagggtgagcgcgtgaaggtg
ttcatcgtcaagcgcaatccgtcgctgaccgcggaacaggtgatcgcccactgccgcaag
aacctcacggggtacaaggtgccgaagctcgtcgagttccgcgacgagctgccgcaaacc
aacgtcggcaagattctgcgccgcgcgctgcgcgacgaggaactcgcgaagcaaaaacct
gcctga
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