Paraburkholderia caffeinilytica: DSC91_006871
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Entry
DSC91_006871 CDS
T06448
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSC91_006871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_006871
Transporters [BR:
pcaf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DSC91_006871
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Ortholog
Paralog
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
DnaA_N
Motif
Other DBs
NCBI-ProteinID:
AXL53446
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All DBs
Position
2:3756579..3757646
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AA seq
355 aa
AA seq
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MYRKESEMKKMTWSAAAASVLMLATTAGAALAGETVTFAGYGGAYQKGIVEALAQPAAAR
LGLSLAQNTTPGLTAVRVQVQSGSPAWDIVNLGSDECAAGSTQNLFEPLDYRQIKTDGMA
PNAWAKDWIASNYYSVVLAYRKDKYPGNPPRTWQDFWNVSKFPGRRAMSDAPIESLEIAL
LADGVQPDKLYPLDMDRATQSIQKLKPAVSVWWSSGAQSAQLIESGEVDMEMIWGSRLTP
VLHDNAPVAYSNTETILGMGCLAIPKGARHVAEAQKMIALMMSPEYQANIPHALEGYGPA
NARAFDVKQFSPQELAELNSSPQNLKNAVKIDGRWWGTGDNQKTATARYKAAISR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcaaggagtcggagatgaagaaaatgacatggtcggccgcggcggcatccgtg
ctgatgctcgccaccacggccggcgcggcgctggcaggcgagacggtgacctttgccggg
tacggaggcgcgtatcagaagggcatcgtcgaggcgctcgcgcaacctgcggcggctcgg
ctcggattgtcgctagcgcaaaacaccacaccgggtctcactgcggtgcgcgtgcaggtg
cagtccggcagtcccgcgtgggacatcgtgaatcttggttcggatgagtgcgcggcgggc
agtacgcaaaatcttttcgagccgctcgattaccggcagatcaagaccgacggcatggcg
ccgaacgcctgggcgaaggactggattgcgagcaactactacagcgtcgtgctcgcgtat
cgcaaagacaagtatccgggtaatccgcctcgtacgtggcaggacttctggaacgtcagc
aagtttccgggtcgccgcgcgatgtccgacgcaccgatcgagtcgcttgaaatcgcgctg
ctcgccgacggtgtccaaccagacaagctttatccgctcgatatggatcgcgccacccag
tcgatccagaaactcaagcccgccgtgagtgtctggtggtcaagcggcgctcaatcggcg
caactgatcgaaagcggtgaagtcgacatggagatgatctggggtagccgcctcacgccc
gtgttgcacgacaacgcgccggtcgcgtattcgaacactgagaccattctgggcatgggc
tgtctcgcgattccgaagggcgcgcggcacgtggctgaggcgcagaagatgatcgcgctg
atgatgtcgcctgagtaccaggcgaacatcccgcacgcgctcgaaggctacggcccggcc
aacgcgcgcgcgttcgacgtgaagcagttctcgccacaggagttggccgaactcaactcc
agtccacaaaacctcaagaacgcggtgaagatcgacggccgctggtggggcaccggcgac
aaccagaaaacagccaccgcgcgttacaaggccgcgatttctcgttga
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