Paraburkholderia caffeinilytica: DSC91_007523
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Entry
DSC91_007523 CDS
T06448
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaf03000
]
DSC91_007523
Transcription factors [BR:
pcaf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
DSC91_007523
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GFIT
Motif
Pfam:
FCD
GntR
HTH_11
TrmB
GMT-wHTH
HTH_CodY
HTH_Crp_2
HTH_29
HTH_10
MarR_2
Rrf2
HTH_24
HVO_A0261_N
HTH_5
DUF8126
HTH_IclR
EAP30
Ribosomal_S25
HTH_41
TFIIE_alpha
Fe_dep_repress
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AXL53870
UniProt:
A0ABQ1NAW2
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All DBs
Position
2:4453605..4454378
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AA seq
257 aa
AA seq
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MDDNMAFQFACFRVSGTRYSHRPFLFLPLMSDLRIDRNAKTLRELTLDKLRGAIVQGYFR
PGARLVERTLCDELGVSRTVVREVLRHLETEGLVEIVARQGPIVARLDPEQVGEIYELRG
LLEANAARACAEQSTPELVRRLREIRAVIEEAFEKQDLPRVLDYTERFYEAMFEGAQKRV
SLAVVKTLNARINRLRALTIATPGRGGESNLEMNTLLDAIERRDGDAASRASAAHIKRTA
ELALSALAQQSEPAGDA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatatggcattccagttcgcgtgcttcagggtatcgggcacgcggtacagc
catcgtccatttctctttttaccgctcatgtcagacctcagaatcgaccgcaatgccaag
accctgcgcgaactcacgctggacaagctgcgcggcgcgatagtgcaagggtatttccgg
ccaggcgcgcggctcgtcgaacgcacgctgtgcgacgaactcggcgtaagccgcactgtc
gtgcgcgaagtgttgcggcatctggagacggaagggctcgtggagatcgtcgcgcgccag
gggccgatcgtcgcccggctcgatcctgaacaggtcggtgaaatctacgagctgcgcggc
ctgctcgaagccaatgccgcacgcgcgtgcgccgagcaatcgacgcccgaactcgtgcgg
cgcttgcgcgagatccgcgcggtgatcgaagaggcgttcgagaaacaggacctgccgcgc
gtgctcgactacaccgagcgtttctacgaggcgatgttcgagggcgcgcaaaagcgcgta
tcgctggccgtcgtcaagacgctgaacgcgcggatcaaccggctgcgcgcgctcactatt
gccacgccggggcgcggcggggagtccaatctcgagatgaacacgctgctcgacgcgatc
gagcggcgcgacggcgatgcggcgtcgcgcgcatcggccgcgcacatcaagcgcaccgcc
gaactggcgttgagcgcgctcgcgcagcaaagcgagccggccggcgacgcctga
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