Porphyromonas cangingivalis: NCTC12856_00333
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Entry
NCTC12856_00333 CDS
T06514
Symbol
topB_2
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pcag
Porphyromonas cangingivalis
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcag03032
]
NCTC12856_00333 (topB_2)
Enzymes [BR:
pcag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC12856_00333 (topB_2)
DNA replication proteins [BR:
pcag03032
]
Prokaryotic type
DNA Topoisomerases
NCTC12856_00333 (topB_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
HVO_2753_ZBP
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
VEJ02327
LinkDB
All DBs
Position
1:complement(391830..393803)
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AA seq
657 aa
AA seq
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MILCIAEKPSAAREIAQVIGATSRHDGYFEGNGYRVTWTFGHLCTLKDPGDYRPEWKRWT
LSSLPIIPERFSIKLLEDKGIDNQFKTIKRLVSEASEVINCGDAGQEGELIQRWVLQLAE
CSCPVKRLWLSSMTSEAISEAFQNLRDSKDFQNLYYAGLSRAIGDWILGLNATRLYTLKY
SKPGERLLSIGRVQTPTLALIVERFEEIQSFKPELYWEIKTLYRDTTFASTKGRYATVEE
AQEVIERIKTSDLKVTDIKTKKGKEGAPRLFDLTSLQVECNKKFSYTAEETLRYIQSLYE
KKLTTYPRVDTTYLTNDIYDKCPSILNGLHQVVPHLIEPLRSKKLTKSKKHFDDSKVTDH
HAIIPTGYKPSGLSTFEQNVYDIILKRFVAIFYPDMQYEATTVMADIEGIEFKATGRIIT
DLGWRAVYDLTTSDEDENNGEEDKNVLPTFAKGERGPHIPDLLEKETQPPKNYTEASLLV
AMETAGKLVDDEDLKDAMKQKGIGRPSTRAAIIETLLKRKYIRKERKSLIPTPMGVELVH
IINNELLKSVRLTGEWEYKLRLIDKGEYAPESFLNELKEMVSALMLEVKLDNRSMQSLLE
SASEKATSKKKKKDTNLIKEGDVCPKCGQGVIIRGKTALGCSRFREGCDMRAPIPEN
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgatcctctgtatcgccgaaaaaccatctgcagcaagagaaatagcccaagtcatcggt
gctacatctcgccatgatggctatttcgaaggaaacggatacagagtgacttggactttc
ggacacttgtgcaccctgaaagacccgggagattatcgccccgagtggaaacgctggaca
ctttcatccctacctatcatacccgaaaggtttagtataaaactattagaagacaaaggg
atagataaccagttcaagaccataaaaagacttgtcagtgaggcttctgaggtaatcaac
tgcggggatgccggacaggagggcgaactgatacaacgatgggtactgcaacttgcggaa
tgcagctgccctgtgaagcgtctctggttgtcatccatgacgagcgaggcaatcagcgag
gcattccaaaacctcagagacagcaaggacttccaaaacttatattacgccgggctgagt
cgtgccatcggagactggatattgggactcaatgcaacacgtttgtatacgttgaagtac
tcaaaaccaggggagcgcctgctctcaataggccgtgtgcagacccctacccttgcctta
atcgtagaacgctttgaggaaatacagagcttcaagcctgaactgtattgggagatcaag
accttgtatagagacacgaccttcgcatcgacaaaaggtcgatacgctactgtcgaagag
gctcaagaggtcatagaacgtataaaaacaagtgatctgaaggtcaccgatatcaaaaca
aaaaagggaaaagagggtgcaccgaggttgtttgaccttacgtctctacaagtagagtgt
aacaagaagttctcatacactgccgaagaaactctgagatacatccaatcgctgtatgag
aaaaaactgacaacatatcctcgtgtggatacaacctatctcactaatgatatctacgat
aaatgtccaagcatcctcaatggtctacatcaagtagttccacatctgatcgaaccccta
agatcaaaaaaactcacaaagtccaagaagcactttgatgactctaaggtcacggatcac
cacgcaatcatacctacaggatataaaccttctgggctttcgaccttcgaacaaaatgta
tatgacatcatactcaagcgttttgtcgctatattttatcctgacatgcagtatgaagcg
acgacagtcatggcagacatagaaggcatagaattcaaggcgacaggtcgcataatcact
gatctcgggtggcgtgcagtgtatgacctgacaacctcggatgaggatgaaaataatgga
gaagaggataaaaatgttctgcccacatttgcgaaaggtgaacgaggaccgcatatccca
gatctacttgaaaaagagacacagcctcccaaaaattatacagaagcatctctgcttgtg
gctatggagacagcaggtaaattggtggacgacgaagatctgaaagatgccatgaagcaa
aaagggatcggccgcccatctactcgtgcggcaatcatcgaaactctactgaaaagaaag
tacatccgaaaggaacgaaagagcctcatcccgacgcctatgggtgtcgagcttgtacac
atcatcaataatgagctactaaaaagcgttcgcctgacaggagagtgggaatacaaacta
agactgatcgacaagggagaatatgcaccggaatcgttcttaaacgaactgaaggaaatg
gtttcagcattgatgttagaagtaaaattagacaatcgttcgatgcagtccctgctcgaa
agcgcaagtgaaaaggcaacatcaaagaaaaaaaagaaggatacaaatctcatcaaagaa
ggagatgtgtgtcctaagtgcggtcagggcgtgatcattcgaggtaaaaccgctctcgga
tgttctcgatttagagagggatgcgacatgagagctcccattcccgaaaactaa
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