Porphyromonas cangingivalis: NCTC12856_00342
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Entry
NCTC12856_00342 CDS
T06514
Symbol
ffh
Name
(GenBank) Fifty-four homolog
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag02024
Quorum sensing
pcag03060
Protein export
pcag03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NCTC12856_00342 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC12856_00342 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC12856_00342 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcag02044
]
NCTC12856_00342 (ffh)
Enzymes [BR:
pcag01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NCTC12856_00342 (ffh)
Secretion system [BR:
pcag02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NCTC12856_00342 (ffh)
Eukaryotic Sec-SRP protein
NCTC12856_00342 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
AAA_16
Zeta_toxin
Seryl_tRNA_N
AAA_33
AAA_17
AAA_24
AAA_19
AAA_18
ATP_bind_1
APS_kinase
ATPase
Motif
Other DBs
NCBI-ProteinID:
VEJ02341
LinkDB
All DBs
Position
1:399223..400545
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AA seq
440 aa
AA seq
DB search
MFDNLSERLERSFKILKGEGQITDINVAETVRDVRKALLEADVNYKVAKQFTDTVREKAM
GQHVLTAIKPGELLVKIVHDELTTLMGGSAVEISLKGSPNIILMSGLQGSGKTTFTGKLG
NFLRNKKGLKPLLVACDVYRPAAIEQLRVLGEQLQLPVYTEPDSKDPVSIAQNAIAQAKR
DGNDTIIIDTAGRLAVDEVMMDEISRIKAAIQPTEILFVVDAMTGQDAVNTAKEFNDRLN
FDGVVLTKLDGDTRGGAALSIRTVVDKPIKFIGTGEKPEALDVFHPNRMADRILGMGDVV
SLVERAQDQYDEEQARKLQKKIAKNQFDFNDFLDQINQIKKMGNIKDLMAMIPGVGKAIK
DLDIDDNAFKSIEAIIFSMTPEERTNPAIINGSRRKRIADGSGTKVQDVNQLLKQFEQTR
KVMKLMSGGGMKNLAKNFRR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaatctttcggagagattagaacgttcgtttaagatactaaagggtgaaggt
cagatcacggacatcaatgtggctgagactgtgcgcgatgtcagaaaagcattgcttgag
gccgatgtcaactataaggtggcaaagcagtttacagacaccgtacgtgagaaggccatg
ggacagcatgtccttactgccatcaaaccgggcgaactccttgtgaagatcgtccatgat
gaacttacgactcttatggggggcagtgcggttgagatctccctgaagggatcgccaaac
atcatcttgatgtccggtcttcaagggtcgggtaagactacatttacaggaaagctcggt
aacttcctaaggaataagaagggactcaagcctttgctggtagcctgtgacgtctatcgc
cctgctgcgatcgagcagcttcgtgtccttggcgaacagcttcagctcccggtgtatacc
gaacccgatagcaaggatccggtctctatcgcacaaaatgcgattgctcaggcaaagagg
gatggcaatgacacgatcatcatcgacacggcgggtcgtcttgctgtggatgaggtgatg
atggatgagatcagtcgtatcaaggcggctatccaacccacagagatcttgttcgtggtg
gatgccatgaccggtcaggatgccgtaaacacagcaaaggagtttaatgatcgtctcaat
ttcgacggcgtcgtccttacgaaattggatggtgatactcgtggtggtgcagctctttcg
attcgtaccgtcgtagataagccgattaagttcatcggtacgggcgaaaagcctgaagct
ctcgatgtcttccatcccaaccgtatggcggatcgtatcctcggtatgggggacgtggta
tctctcgtggagcgtgctcaggatcagtatgacgaagagcaggctcgtaagcttcagaag
aagatcgcaaagaatcagtttgacttcaacgacttcttggatcagataaatcagatcaag
aagatgggtaacatcaaggatctcatggccatgatccccggtgtcggtaaggcgataaag
gatcttgatatcgatgacaatgcgttcaagagcatagaggcgatcatcttctccatgact
cccgaagagcgaaccaatcctgccatcatcaatggctcacgtcgtaaacgtatcgccgat
ggcagtggtaccaaggtgcaggatgtcaatcaactcctcaaacagttcgagcagactcgt
aaggtcatgaagctgatgagtggaggaggaatgaaaaatcttgcaaagaacttcagacgc
taa
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