Porphyromonas cangingivalis: NCTC12856_00366
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Entry
NCTC12856_00366 CDS
T06514
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pcag
Porphyromonas cangingivalis
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcag03009
]
NCTC12856_00366 (rluB)
Enzymes [BR:
pcag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NCTC12856_00366 (rluB)
Ribosome biogenesis [BR:
pcag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC12856_00366 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
VEJ02376
LinkDB
All DBs
Position
1:425576..427309
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AA seq
577 aa
AA seq
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MDIEKTEEQKKHTDSQERSASYSTNNDGFERVNNREGLYENGFDNEESAPNYRPRGFRNN
NNRYDNRPDRGGYPRRNDNRGGGYYPQQDNNQREYQSNREYPRRGYDNRYPNEDFSYRDR
FLATQKTEDQPLDENRDDQQPQRRRRMRISEVKAMGNPQEERFGGYGQNPQQRFDNNNRY
NRPYDNRRGMGGDHYQRQDRYRNNYGSYGNDRYSRMDEYDRRGGYNNYESGHDNSQREYY
KERYNQARENNRQQFEYRMPYNNGDDRYQQGRNNNNRRPQQRRGYGNNEGYGNNQMRRGG
GYNNDNKYPQKFQKKSKPGQKFTPRPTPIVYENDYFDENEPIRLNKYLANSGVCSRREAD
ELIQNGTVLVNGEVVTELGTKITLKDSVVVDGKEVKPENKVYVLLNKPRNCVTTSDDPQE
RLTVLHLVKNACKERIYPVGRLDRNTTGVLLLTNDGDMASKLVHPSFKKKKIYHVWLDKE
VTVEDMQKIADGIELEDGEMHADAISYASEDDHTQVGIEIHSGRNRIVRRIFEHLGYHVY
KLDRVYFAGLTKKNLPRGKWRYLSQDEVNMLRMGAFE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatatagaaaagactgaggaacagaaaaaacacactgattctcaagagaggagtgct
tcgtactctaccaataatgatggcttcgagcgagtaaacaatcgagaaggcctttacgaa
aatggttttgacaacgaagagtctgcgccaaactatcgccccaggggatttcgtaacaac
aataaccgctatgacaatagaccggatcgtggtggctaccccagaaggaatgataatcgt
ggtggcggatactatccacaacaagataacaaccaaagggaatatcaatccaatagagaa
tatcctcgcagagggtatgacaataggtatcccaacgaagacttcagctatagggataga
ttccttgcgactcagaagaccgaagatcagcctcttgatgagaatagagatgatcaacag
cctcagagacgtcgccgtatgcgcatatccgaggtgaaggcgatgggcaatccccaagaa
gaacgtttcggtgggtatggtcaaaatcctcagcagaggtttgacaacaataataggtac
aatcgtccttatgacaatcgtcgtggcatgggtggtgatcactatcagcgtcaggatcgt
tatcgcaacaattatggtagctatggcaatgatcgctactcccgcatggacgaatacgat
cgtagggggggatacaacaactacgagtccggacacgacaactctcagagggagtactat
aaggagcgttacaaccaagcgagagaaaataaccgccaacagtttgagtacagaatgcct
tacaacaatggcgatgacagatatcagcaggggcgtaacaataataacagacgtcctcaa
caacgtcgtggttatggcaataacgaaggctatggcaacaatcaaatgagacgtggtggc
ggatacaataatgacaacaagtatccgcagaagttccaaaagaagtcgaagccgggacag
aagttcaccccccgtcctacacctatcgtgtacgaaaacgactactttgatgaaaacgaa
ccaatccgtctcaataagtaccttgcaaattcgggcgtttgctcaagacgagaagctgac
gagctcattcaaaatgggacagtccttgttaatggagaggtggtgaccgagctcggtaca
aagataacgctcaaggactctgtcgtcgtcgatggtaaggaggtgaagcctgaaaacaag
gtatatgtcctcctcaataaaccaagaaactgtgtcaccacttcggatgacccacaggag
cgattgacagtgcttcacctcgtgaagaatgcttgcaaggagcgcatctatcctgtcgga
cgtcttgaccgaaatactacaggtgtccttctgctcacaaatgatggtgatatggcatcg
aagctcgtacacccttcatttaaaaagaagaagatataccacgtatggctcgataaagaa
gtcactgtcgaggatatgcagaagatcgcagatggtatcgaactcgaagatggagagatg
cacgcagatgcgataagctatgcttctgaagatgatcacactcaggtggggatagagatc
cactcggggcgcaaccgtatcgttcgtcgtatcttcgaacacctcggttaccatgtttat
aagttggatcgtgtgtacttcgcaggtctgacaaagaagaacctcccccgcggcaaatgg
agatacttgtctcaagatgaggtgaatatgcttagaatgggtgcgtttgaataa
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